Gene Bcer98_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0427 
Symbol 
ID5344912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp480514 
End bp482007 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content37% 
IMG OID640838007 
ProductPTS system, N-acetylglucosamine-specific IIBC subunit 
Protein accessionYP_001373777 
Protein GI152974260 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000101711 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACAGT TTTTACAACG TATTGGTAAA GCATTAATGC TTCCAATTGC AGTATTGCCA 
GCAGCAGGAT TATTGCTTCG TTTAGGGCAA CCAGATGTAT TTGATATACC TGTTATGGCA
CAAGCCGGTG CAGCTATTTT TGATAACTTA GCACTTATTT TTGCAATTGG CGTTGCAATC
GGTTTGTCAG TTGATGGTAG TGGTGCTGCA GGTCTTGCAG GTGCGATTGG TTATCTAGTT
ATGAAGAATA CAACTAATAC TTTAAGTGTT AGTTATTCGA CAGCAGAACT AAATGATAAA
TTAAAAAGTG TTCAAGACTT ATTGGGGTCA GTTGATCCAA GTAAGTTAGC GGATACAATG
ACAAAAGTTT CAAAAGCAGC AGCGTTAACA CCTAAAATAA ATATGGCGAT CCTTGGTGGG
ATTATTGCCG GGATTGTTGC TGGGTTATTA TATAACAAAT TCCATAAGAT CAAATTGCCA
GAATGGTTAG GTTTCTTTGC AGGAAAACGC TTTGTTCCAA TTATTACATC CGTCGTTATG
CTTCTTTTAG GATTAGTATT TGGTCAAATT TGGCCAACAA TTCAAAGTGG CATTGATGCA
GTAGCTCATG GTATTGTCAA CTTAGGTTCA ATTGGATCTG GTTTATTCGG TTTATTGAAC
CGTTTATTGA TTCCAATTGG CTTGCACCAT GTAATGAACA CATACTTCTG GTTTGTGCTT
GGTGACTTTA CAAATGCAGC AGGCGATATT GTTCATGGTG ATATTGCTCG TTTCTTTGCG
AAAGATCCAT CAGCAGGTAT GTTTATGACT GGTTTCTTCC CAGTTATGAT GTTTGGTTTA
CCAGCAGCAT GTTTCGCAAT GATTGCAGCT GCGAAACCAG AAAAACGTAA AATGGTTACA
GGAATGTTAG CGGGTCTTGC ACTAACTTCA TTTTTAACTG GTATTACAGA ACCAATTGAA
TTCTCGTTCA TGTTCTTATC TCCAGTATTA TATGGTATCC ATGCTGTATT AACAGGTATT
TCACTATTTG TAACAACATC ACTTGGCATT CATGATGGTT TTTCATTTAG TGCTGGTGCC
ATTGATTATT TCTTAAACTT TGGTATTGCA ACAAAACCAT TATTATTAGC AGGAATTGGA
TTAATTTATG CAGCTATTTA CTTTGTTGTA TTCTACTTCT TAATTAAGAA ATTTAACTTG
AAAACTCCAG GGCGTGAAGA TGATGAGGAA TTAGCAACAG ATGATGAAGC GCCAGTTGCA
GGTTCGATTG GAGAAGCATA TGTAACTGCA CTCGGCGGAA AAGACAACTT AACAGTGATT
GATAACTGTG CGACTCGTCT CCGTCTACAA GTAAAAGATG CAAACTTAGT AAATGAATCA
GCGTTAAAAC GTGCTGGTGC GAGAGGTGTT ATGAAATTAA GTAACACAAG TGTGCAAGTT
ATCGTTGGAA CAAACGTTGA ATCAGTTGCT GAAGATATGA AAAAACACGT ATAA
 
Protein sequence
MLQFLQRIGK ALMLPIAVLP AAGLLLRLGQ PDVFDIPVMA QAGAAIFDNL ALIFAIGVAI 
GLSVDGSGAA GLAGAIGYLV MKNTTNTLSV SYSTAELNDK LKSVQDLLGS VDPSKLADTM
TKVSKAAALT PKINMAILGG IIAGIVAGLL YNKFHKIKLP EWLGFFAGKR FVPIITSVVM
LLLGLVFGQI WPTIQSGIDA VAHGIVNLGS IGSGLFGLLN RLLIPIGLHH VMNTYFWFVL
GDFTNAAGDI VHGDIARFFA KDPSAGMFMT GFFPVMMFGL PAACFAMIAA AKPEKRKMVT
GMLAGLALTS FLTGITEPIE FSFMFLSPVL YGIHAVLTGI SLFVTTSLGI HDGFSFSAGA
IDYFLNFGIA TKPLLLAGIG LIYAAIYFVV FYFLIKKFNL KTPGREDDEE LATDDEAPVA
GSIGEAYVTA LGGKDNLTVI DNCATRLRLQ VKDANLVNES ALKRAGARGV MKLSNTSVQV
IVGTNVESVA EDMKKHV