Gene Bcer98_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0234 
Symbol 
ID5344617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp246052 
End bp247587 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content41% 
IMG OID640837796 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001373595 
Protein GI152974078 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGTA CTAGGATAAG AAAAGGAGAA GTAACATTGA CAACATTTCG AGAATTAGGA 
TTAAGCGATT CTTTACTGCA ATCTGTTGAA AAAATGGGCT TTGAAGAGGC TACACCAATT
CAAGCTGAAA CAATTCCACA TGCATTGCAA GGTAAAGACA TTATTGGGCA AGCGCAAACA
GGTACAGGAA AAACAGCTGC ATTCGGATTA CCACTATTAG AAAAAGTGGA CACAAATAAA
GAAATGGTTC AAGGAATTGT GATCGCGCCA ACACGTGAAT TAGCAATTCA AGTAGGTGAA
GAACTTTATA AAATTGGTCA ACATAAGCGC GTTCGTATTT TACCAATCTA TGGTGGCCAA
GATATTAACC GTCAAATTCG TGCACTAAAA AAACGTCCAC ACATTATTGT TGGTACGCCA
GGACGTATTT TAGATCATAT CAATCGTAAA ACACTTCGTT TGCAAAATGT AGAAACGGTT
GTTCTTGATG AAGCGGATGA AATGCTAAAC ATGGGCTTTA TTGAAGATAT TGAAGCGATT
TTAACAGATG TGCCAGAAAC GCATCAAACG CTATTATTCT CAGCGACAAT GCCAGAGCCG
ATTCGTCGCA TTGCGGAGCG TTTCATGACT GAGCCTCAGC ACATTAAAGT AAAAGCAAAA
GAAGTAACAA TGCCAAATAT CCAGCAGTTC TATTTAGAAG TACAAGAAAA GAAAAAATTT
GACGTATTAA CACGTTTATT AGATATTCAA TCTCCAGAAC TTGCAATCGT ATTCGGTCGT
ACAAAGCGCC GTGTTGATGA ATTATCAGAA GCACTAAACT TACGCGGTTA TGCAGCGGAA
GGGATTCATG GTGATTTAAC ACAAGCGAAA CGCATGTCCG TACTTCGTAA ATTCAAAGAA
GGTTCTATTG AAGTTCTTGT TGCAACGGAT GTAGCAGCAC GTGGTCTTGA TATTTCAGGT
GTAACGCACG TATACAACTT TGACATTCCA CAAGATCCAG AATCATACGT TCACCGTATT
GGCCGTACGG GACGTGCTGG TAAAACGGGT CTTGCGATGT TATTTGTAAC ACCGCGTGAA
ATGGGACAAT TGAAAAATAT CGAGCGTACA ACAAAGCGTA AAATGGATCG CATGAAAGCA
CCAACGCTGG ATGAAGCATT AGAAGGGCAA CAACGTCTAA TTGCGGAAAA ACTACAAAGT
GCAATTGAAA ATGACAATTT ATCATACTAC AAGCGTATTG CAGAAGAAAT GTTAGAAGAA
AATGATTCTG TAGCGGTTGT AGCAGCTGCT TTAAAAATGA TGACAAAAGA GCCGGATACA
ACGCCAATCT CTTTAACATC AGAACCGCCT GTAATTTCAC GTGGTTCTAA GAAACGAAGC
GGCGGATATC GTGATGGTAA CCGCAACCGT AGTCGTGACC GTGATGGCCG TAATCGCGAT
CGTAATCGCA GCCGTGGTCG TAAAGGTGAA GGTCGCTCTG GCTCTTCAAA TGGACGTGGT
GAAAGAAAGC ATCATAGCCG TAAGCCACAA GCTTAA
 
Protein sequence
MISTRIRKGE VTLTTFRELG LSDSLLQSVE KMGFEEATPI QAETIPHALQ GKDIIGQAQT 
GTGKTAAFGL PLLEKVDTNK EMVQGIVIAP TRELAIQVGE ELYKIGQHKR VRILPIYGGQ
DINRQIRALK KRPHIIVGTP GRILDHINRK TLRLQNVETV VLDEADEMLN MGFIEDIEAI
LTDVPETHQT LLFSATMPEP IRRIAERFMT EPQHIKVKAK EVTMPNIQQF YLEVQEKKKF
DVLTRLLDIQ SPELAIVFGR TKRRVDELSE ALNLRGYAAE GIHGDLTQAK RMSVLRKFKE
GSIEVLVATD VAARGLDISG VTHVYNFDIP QDPESYVHRI GRTGRAGKTG LAMLFVTPRE
MGQLKNIERT TKRKMDRMKA PTLDEALEGQ QRLIAEKLQS AIENDNLSYY KRIAEEMLEE
NDSVAVVAAA LKMMTKEPDT TPISLTSEPP VISRGSKKRS GGYRDGNRNR SRDRDGRNRD
RNRSRGRKGE GRSGSSNGRG ERKHHSRKPQ A