Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_0072 |
Symbol | lysS |
ID | 5344294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | + |
Start bp | 80869 |
End bp | 82368 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640837616 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001373442 |
Protein GI | 152973925 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.407963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAACA TGAACCATGA AGAATTAAAC GACCAATTAC TTGTTCGTCG TGAGAAACTA CATAACTTAC GTGAACAAGG TATCGATCCA TTTGGTAAAC GTTTTGAACG TACACATTCA TCAAAAGAGT TACTGAACTT GTATGGAGAG TTCTCTAAAG AAGAATTAGA GGAAAAAGCA ATTTCTGTTT CTATTGCTGG GCGCATTATG ACAAAGCGCG GTAAAGGGAA AGCTGGTTTT GCGCATATTC AAGATTTACA TGGACAAGTT CAAATTTACG TTCGTAAGGA TGCCGTTGGA GATGAAGAAT ATGAATTGTT TAAAACGGCT GATTTAGGTG ACTTAGTCGG AATTGAAGGG AAAGTTTTCA AAACAAATGT TGGAGAACTT TCTGTAAAAG CAACATCATT TACTTTATTA ACGAAATCTC TTCGTCCACT TCCGGATAAA TACCATGGAT TGAAAGATAT TGAGCAACGT TATCGTCAAC GTTACTTAGA TCTAATCACA AGTATGGAGA GTCGCGAAAC ATTTGTTACT CGCAGTAAAA TCATCCGTGA AATGAGAAGA TATCTGGATG ATAATGGCTA TCTTGAGGTA GAAACACCAA TGATGCATAC AATTGCAGGT GGTGCATCTG CTCGTCCGTT CATTACGCAT CATAATGCAT TAGATATGGA ATTATATATG CGTATTGCAA TTGAGTTGCA TTTAAAACGT CTTATTGTAG GCGGCCTAGA AAAAGTATAT GAAATTGGCC GTGTTTTCCG TAATGAAGGT GTATCAACAC GTCATAATCC AGAATTTACA ATGATTGAAT TATATGAAGC GTATGCTGAC TATAAAGATA TTATGAAACT AACAGAAAAT ATGATTGCTC ATATTGCGAA GCGAGTGTTG GGTACAACAA CAATCCAATA TGGTGAACAT GAAATTAATT TAGAACCAGA ATGGACGCGT CTTCATATGG TAGATGCAAT TAAACAATAT TGTGGAGTGG ACTTCTGGAA ACCAATGAGC GTGGAAGAAG CGCGTGCATT AGCGAAAGAA CATGATGTAG AAATTAAAGA TACAATGGAA GTTGGTCACA TCATTAACGA ATTCTTTGAA CAAAAAGTAG AAGAAAAGTT AATTCAACCT ACATTTATCT ACGGGCATCC AGTAGAAATT TCGCCTCTTG CGAAAAAGAA CGATGAGGAT TCACGATTTA CAGATCGTTT TGAACTATTC ATTGTTGCAC GCGAACATGC AAATGCATTT ACTGAATTAA ATGATCCAAT CGATCAGAAA GAACGTTTTG AAGCTCAATT AAAAGAGCGT GAACAAGGAA ATGATGAGGC GCATATGATG GACGATGATT ATATCGAAGC TCTTGAATAT GGTATGCCTC CTACTGGTGG ATTAGGTATT GGTATTGATC GCCTTGTTAT GCTATTAACA AATTCACCAT CTATCCGTGA TGTATTGTTA TTCCCTACAA TGCGTCATAA ACAAGACTAA
|
Protein sequence | MDNMNHEELN DQLLVRREKL HNLREQGIDP FGKRFERTHS SKELLNLYGE FSKEELEEKA ISVSIAGRIM TKRGKGKAGF AHIQDLHGQV QIYVRKDAVG DEEYELFKTA DLGDLVGIEG KVFKTNVGEL SVKATSFTLL TKSLRPLPDK YHGLKDIEQR YRQRYLDLIT SMESRETFVT RSKIIREMRR YLDDNGYLEV ETPMMHTIAG GASARPFITH HNALDMELYM RIAIELHLKR LIVGGLEKVY EIGRVFRNEG VSTRHNPEFT MIELYEAYAD YKDIMKLTEN MIAHIAKRVL GTTTIQYGEH EINLEPEWTR LHMVDAIKQY CGVDFWKPMS VEEARALAKE HDVEIKDTME VGHIINEFFE QKVEEKLIQP TFIYGHPVEI SPLAKKNDED SRFTDRFELF IVAREHANAF TELNDPIDQK ERFEAQLKER EQGNDEAHMM DDDYIEALEY GMPPTGGLGI GIDRLVMLLT NSPSIRDVLL FPTMRHKQD
|
| |