Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_C7703 |
Symbol | |
ID | 3734590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007509 |
Strand | + |
Start bp | 1350647 |
End bp | 1351594 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637761404 |
Product | ABC proline/glycine betaine transporter, periplasmic ligand binding protein |
Protein accession | YP_367391 |
Protein GI | 78060816 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.744647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCA GAATGGCTCG CATGCTCACG ACGCTGGTCA TCGCGTCGTC GCTGCCCGGC ATGGCTTCCG CGCAAGACGA CGCAGCGTGC CGACCGGTGC GGCTCTCGAA TATCGGCTGG ACCGACATTA CGGTCACCAC GGCGCTGGCG TCGCTGCTGC TCGAGAGTCT CGGCTATCGC CCGACGACGA CGCTGTCGTC CGTACCGATC TCCTTCGCCG GACTGAAGAG CCGGCAGATC GACGTGTCGC TCGGCTACTG GTGGCCCATT CAGGACAAGC AGATCCAGCC GTTCCTCGAT TCGCATGCGT TCGTCAAGCT CGAACCGCCG AACCTGTCCG GCGCGAAAGA AACGCTCGCC ACGGTCGACT ACGCGTACCA GGGTGGGCTC CGGTCGTTCG ACGACATCGC GAAGCACCGC GCCGAACTCG ACGGAAAGAT CTACGGGATC GAACCGGGCA GCAGCGCGAA CGCCACGATT CAGCGAATGA TCGACAACAA CGAGCACGGC CTGCGCGGGT TCAAGCTCGT CGAATCGAGC GAAGCGGGCA TGCTGGTCAC CGTCCAGCGC GCGGTACGCG AAAAGAAATG GGTGGTATTC ATCGGATGGG CGCCGCACCC GATGAACATC CAGGTGCCGA TCCAGTATCT CGCCGGCGGC GACGCGTCGT TCGGCCCGAA CTACGGAGAA GCCCGCGTGT ACACGCTGAC GGCGAACGGC TTTGCCCAAC GCTGCCCGAA TGCGGGGCGG CTGGTTTCGA ACCTGCGCTT TACGACCGAC ATGGAAAACC GGTTGATGCT CGACGTGATG AACAAGACGC GGCCCGATGA CGCGGCAAGG GCGTACCTCC GGCAGCATCC CGACGTGCTC GACGGCTGGC TCGACGGTGT CACGAGTTTC GACGGCAGGA ACGGGCTGGC CACCGTGAAA ACGGCGCTCG GACTATAG
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Protein sequence | MKSRMARMLT TLVIASSLPG MASAQDDAAC RPVRLSNIGW TDITVTTALA SLLLESLGYR PTTTLSSVPI SFAGLKSRQI DVSLGYWWPI QDKQIQPFLD SHAFVKLEPP NLSGAKETLA TVDYAYQGGL RSFDDIAKHR AELDGKIYGI EPGSSANATI QRMIDNNEHG LRGFKLVESS EAGMLVTVQR AVREKKWVVF IGWAPHPMNI QVPIQYLAGG DASFGPNYGE ARVYTLTANG FAQRCPNAGR LVSNLRFTTD MENRLMLDVM NKTRPDDAAR AYLRQHPDVL DGWLDGVTSF DGRNGLATVK TALGL
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