| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C7374 |
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| Symbol | |
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| ID | 3734922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007509 |
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| Strand | - |
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| Start bp | 980983 |
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| End bp | 986547 |
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| Gene Length | 5565 bp |
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| Protein Length | 1854 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637761075 |
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| Product | YadA/haemagluttinin like protein |
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| Protein accession | YP_367062 |
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| Protein GI | 78060487 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5099] RNA-binding protein of the Puf family, translational repressor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00142444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.240899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT CGTTCAAGTC GATCTGGAAC GAAGCATTGG GAGCCTGGGT TGCGGCTTCG
GAGCTTGACC GTGCGCGCGG AAAGCGCGTC GCGTCGTCGC GTGGCACGCC GGAGCGTGCG
TTGGACGGAG GCGCCGCGGC GCGCGCGGGC ACGCCTTCGA CTCCGTCGCT CAGGCGGCTC
ACCGTGCTGA TGGCGTCTGC GTATCTCGCG CTGTTCCATG CCGGCGCGCA CGCGCAGTAC
AACCCGGATG GCGGCACGGC CACCGGCGGC ATCTCGTCGA TCGCGATCGG TGTCGGCTCA
AGTGCCGCGC AGACGAATTC CACCGCGTTG GGCAACCTGT CGACGGCGCA GGGCGTGTCG
GCCACGGCGC TCGGCCCGGG CGCGCATGCG ATGGGTGATG CGTCGACGGC CGTCGGCATC
AACGCGCAGG CGACCGGCGT CAACAGCGCG TCGATGGGCG TGCAGGCGAT CGGGTCGGGC
GATTACTCGG TTGCCATCGG CAACCTCGCC AGTGCGACGC AAAGCAGCAC GGTGGCAATA
GGCAGCGGGG CGGGCGCGAC CAGTGTGTCG GCAATCGGGA TCGGCAACAA TGCAACGGCC
TCCGGTCAGA GTTCGGCAGC GCTCGGTTCT GGCGCGGTTT CGTCGGGCCT CAGCAGCGTT
GCGCTCGGCT TTTCGGCGCA AGCGACCAAC CAGGGCGCGA TTGCGCTCGG CAACCAGTCC
ACGAGTTCTG GCGCGGCCGG TGTAGCGGTG GGCAGTGGCG CGCTGGCTTC CGGCAATTCT
GCTCTCGCGA TGGGTGTCAA CAGCGGCGGG AAGGGCACGA CGTCGATCGC GATCGGCTGG
GGCGGCACCG CGGGGGTGGC CGGCTCGGGC ACGCAGTCGC TCGGTACCAG TTCGATCGCG
TTGGGCTCGA ATACGACGGC TGGCGCCGAT ACCTCGATGG CGTTCGGCAC GAGCGCGAAT
GCGGCGGGTG TCAGTTCGAT TGCTGTGGGC GTCCAGTCGA GCGCGACGAA GCAGTTCGCG
ACCGCGCTTG GTAATGCCTC GCTTGCGACC GGCGTATCGG CGAGCGCACT GGGGGCCGGT
GCGACGGCGT CGGCCACGAA TGCGACGGCC ATCGGCATCA ACAGCGTCGC GGCGGCGGGT
TCCACAGTGG CGATCGGCGA CAGCAACTCT GTCGCGGCCG CGGCGGGTGC AGGCTCGATT
GCTGGGGGCA ACAACTCGAA GGTGCTGGGC GGCCTCGGTG CCGTCGCGCT CGGTCTGGGA
CAGACGGTCA GCGGCAACGG TGCGGTGGCG ATCGGCGATC CGAGCACCGC GATCGGCACC
GGCGCGGTCA CGGCCGGGTC GAACAACACG GCGAACGGCG ACGGCGCGGT CGCCATCGGC
AATTCGAACA TCGCTCAGGG CACCGGCTCG CTCGCGCTCG GCAACACGTC GACGGCCGCG
GCGGCCGGTG CGGTGGCGTT TGGCGCGTCG GCGGTCGCGA ACAATGCGGG CGATGTCGCG
CTCGGTTCGG GTTCGACGAC GGCCGTGCCG AATCCGACCG CAAGCGCGAC GATCGGCGGC
GTGACGTACA CGTTCAAGGG CACGAATCCG ACCAGTGTCG TCAGCGTCGG TGCGGCAGGG
ACCGAGCGCC AGATCACCAA TGTCGCGGCC GGGCGCATCA GTTCGGCGAG CACGGATGCG
ATCAACGGGT CGCAGCTCGA TGCGACAAAT CAGGCGGTGA ATTCGCTGTC GACTTCGACG
GCGTCGAGTG TCAGTTCGTT GTCGACGGGG GTGTCGTCGT TGTCGACCGG GTTGTCGTCG
GCCAATAGTG CGATCACGTC GCTTTCGACG TCGGCTTCGA CGGGGATCAG CTCGCTGTCG
ACGGGGTTGA GTTCGACCAA CAGCGCGGTG ACGTCATTGT CGACCTCTAC GTCGACCGGA
TTGTCGTCGG CCAATAGCGC GATCACGTCG CTGTCGACTT CGACCTCGAC CGGCATCAGC
TCATTGTCGA CGGGGTTGAG TTCGACCAAC AGCTCGGTGA CGTCATTGTC GACTTCGACG
TCGACGGGCC TGTCGTCGGC CAATAGCGCG ATCACGTCGC TTTCGACGTC AGCGTCGACG
GGTATCAGCT CGCTGTCGAC GGGGTTGAGC TCGACCAACA GCTCGGTGAC GTCATTGTCG
ACTTCGACGT CGACGGGCCT GTCGTCGGCC AACAGTGCGA TCACGTCGCT TTCGACATCG
ACTTCGACGG GCATCAGCTC ATTGTCGACG GGGTTGAGCT CGACCAATAG CTCGGTGACG
TCATTGTCGA CGTCTACGTC GACGGGCCTG TCGTCGGCCA ATAGTGCGAT CACGTCGCTT
TCTACGTCGA CTTCAACCGG CATCGGCTCG CTGTCGACGG GGTTGAGTTC GACCAACAGC
TCGGTGACGT CGTTGTCGAC CTCCACGTCA ACCGGATTGT CGTCGGCCAA TAGCGCGATC
ACGTCGCTGT CGACTTCGAC CTCGACCGGC ATCAGCTCGT TGTCGACGGG CTTGAGCTCG
ACCAACAGCT CGGTAACGTC GCTGTCCACC TCGACCTCGA CGGGTATCAG CTCGCTGTCG
ACCGGCCTGA GTTCGACCAA CAGCGCAGTG ACGTCATTGT CGACGTCCAC ATCAACCGGC
CTGTCGTCGG CCAACAGTTC GATCGCATCG CTGTCCACGT CGACGTCGAC GGGCATCAGC
TCGTTGTCGA CGGGGTTGAG TTCGACCAAC AGCGCTGTTA GCTCATTGTC GACGTCCACG
TCGACCGGTC TGTCGTCGAC CAATAGCACG ATCACGTCAC TGTCCTCGTC GGCTTCGACC
GGCTTGAGTT CGACCAACAG CTCGGTGGCG TCGCTGTCGA CGTCGACCTC GACGGCTGTC
GGCTCGTTGT CCACCGGCCT GAGTTCGACC AACAGCGCGG TCACGTCACT GTCGACGTCG
ACGTCGACCG GCATCAGTTC GCTGTCCACC GGCCTGAGCT CGACCAACAG CGCGGTCACG
TCGCTGTCGA CGTCGACCTC GACGGCCGTC GGCTCGTTGT CGACCGGCCT GAGTTCGACC
AACAGTTCGG TCACGTCGCT GTCGACGTCG ACCTCGACGG CTGTCGGTTC ATTGTCCACC
GGCCTGAGTT CGACCAACAG TTCGGTCACG TCGCTGTCGA CGTCCACGTC GACGGCTGTC
GGCTCGTTGT CCACCGGCCT GAGCTCGACC AACAGCGCGG TTACGTCGCT GTCGACGTCG
ACCTCGACGG CCGTCGGCTC GTTGTCCACG GGCCTGAGTT CGACCAACAG TTCGGTCACG
TCGCTGTCGA CGTCGACCTC GACGGCTGTC GGTTCGTTGT CCACCGGCCT GAGTTCGACC
AACAGTTCGG TCACGTCGCT GTCGACGTCG ACCTCGACGG CCGTCGGCTC GTTGTCCACG
GGCCTGAGCA CGACCAACAG CACGGTCACG TCGCTGTCGA CTTCGACGTC GACCAGCATC
AACTCGCTGT CCACCGGCCT GAGCTCGACC AACAGCGCGG TCATGTCGCT GTCGACGTCG
ACCTCGACGG CTGTCGGCTC GCTGTCCACC GGCCTGAGCA CGACCAACAG CAACGTCACG
TCGCTGTCGA CCGCGACCTC GACGAGCATC GGTTCGCTGT CCACCGGGCT CAGTTCGACC
ACGAGCTCGA TCGCGTCGTT GTCGACGTCG ACCTCGACGA CCGTCGGCTC GCTGTCCACC
GGCCTGTCGA GCACGAACAG CAACCTGACG TCGCTGTCCA CCGCAACGTC GACGGGTATC
GGCTCGCTGT CGACCGGCCT CAGCTCGATC GCCAACAACA ACACCAACCT CGGTAACAGC
ACGGCGGGCG CGATCGGCGG CGGGGCCACC TACGATCCGA CGACCGGGAA GATTTCCGCG
CCGTCGTACG TGACGTACAA CAGCGACGGT TCGACGACGA TCAACAACAA CGTCGGCTCG
GCGATCGACA ACATCAACGC GCACGGCATC AAGTATTTCC ACGCGAACTC GACCGCACCG
GACAGCCAGG CGCTCGGCGT CGACAGCGTC GCGATCGGCC CGAATGCGAT CTCGAAGGTG
GACGGCAGCA TCGCGCTCGG TTCGGGTTCG GTATCCGATC GCGCGACGAC GCCGGCGTCG
GGCATCATCC GCAACGGCAC CGCATCGATC CCGTTCAACA CGACGGACCA GACGCTGCTC
GGCGCGGTGT CGGTCGGCGA CGCGACCAGC AAGACGTATC GCCAGATCAC CAACGTCGCG
GACGGTACCG GCCAGCAGGA CGCGGTCACT GTGCGGCAGC TCACCGGCGC ATTGCAGTCG
TTCGCGGTCA CGGGCCAGAA GTATTTCCAC GCGAATTCGA CGGCAGCGGA CTCGCTCTCC
GTCGGCGCGG AATCGGTCGC GGTGGGGCCG ACGACGGTCG TCAACGGCGA CAACGGCGTG
GGCATCGGCA ACGGTGCGAT CGTCGACCAG ACCGCTCCGG GCGGCGTCGC GATCGGGCAG
GCGGCGAGTG TCGCGCAGGC CGACGCGATC GCGCTCGGCA GCGGCGCGAC GGCGTTGGGC
GCGCAGTCGG TTGCACAGGG CGCCAATGCG AAGGCGGTCA GCGTGGGCAG CGTTGCACTG
GGTTCCGGCG CGCTCGGCAA CGCGACCGAT GCGCTCGCGC TCGGCGCCGG CGCGTCCGCG
ACGTTCGCGA ACAGCGTGGC GTTGGGCGCC GGTTCGTTGA CGACGGTCGG CGCGCTGACG
AACTACGTGG CGTACGGCCT GAGCAGCCCG CAATCGTCGG CCGGCGAAGT GAACATCGGC
AACCGGCAGA TCACGGGCCT CGCGGCCGGC AAGAACGGCA CGGACGCGGT GAACGTATCG
CAGCTCGATT CGGTCGCGAA CCAGCTGACG ACGCTGATCG ACCAGCGCAC GACCAACCTC
GGCGGGCAGT ACACGACGAA CCCGAACGGC ACGAACGTGC CGCCGGGGTC GACCGGCCCG
AATTCGTCGG CGGGTGGGTC GGGCGCGGTG GCATCGGGCT CGAACAGCAC GGCGGTCGGC
AACAATTCGC TCGCATCGGG CAACGGCTCT ACCGCCATCG GCGTGGGCTC GACGGCGTCG
GGCAACAATT CGGCCGCGAT CGGCACGGGC AGCAACGACG GCGGGCGGTC GAACGTCGTC
GCGGTCGGTT CGACGGAGTC GGCGCGCCAG GTCGTCAACG TCGCGGCCGG CACGCAGGGC
ACGGATGCGG TGAACGTGAA TCAGCTGAAT GCCGTGTCGA ACCAGTTCAC GCAGTCGCTG
AACACGGTCA ACAACCAGCT CACGCAGATG CAGCAGCAGA TCCAGCAGAC CGATTCGATG
GCACGTGAGG GGATTGCGGC AACCGCCGCG ATGGCGTCGA TCCCGCACAT GGACCGCGAC
TCGAACTTTG CGATGGGGGT CGGCACGGCG ACGTTCCAGG GGCAGAAGGC CATGGCGGTC
GGCGTGCAGG CGCGCGTCAC GGAGAACCTG AAGGCGACGC TGAACGGCGG CTTCGCCGGG
AGCCAGCGCG TCGTCGGCGC GGGCATGCTG TATCAGTGGA AGTGA
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| Protein sequence | MNKSFKSIWN EALGAWVAAS ELDRARGKRV ASSRGTPERA LDGGAAARAG TPSTPSLRRL
TVLMASAYLA LFHAGAHAQY NPDGGTATGG ISSIAIGVGS SAAQTNSTAL GNLSTAQGVS
ATALGPGAHA MGDASTAVGI NAQATGVNSA SMGVQAIGSG DYSVAIGNLA SATQSSTVAI
GSGAGATSVS AIGIGNNATA SGQSSAALGS GAVSSGLSSV ALGFSAQATN QGAIALGNQS
TSSGAAGVAV GSGALASGNS ALAMGVNSGG KGTTSIAIGW GGTAGVAGSG TQSLGTSSIA
LGSNTTAGAD TSMAFGTSAN AAGVSSIAVG VQSSATKQFA TALGNASLAT GVSASALGAG
ATASATNATA IGINSVAAAG STVAIGDSNS VAAAAGAGSI AGGNNSKVLG GLGAVALGLG
QTVSGNGAVA IGDPSTAIGT GAVTAGSNNT ANGDGAVAIG NSNIAQGTGS LALGNTSTAA
AAGAVAFGAS AVANNAGDVA LGSGSTTAVP NPTASATIGG VTYTFKGTNP TSVVSVGAAG
TERQITNVAA GRISSASTDA INGSQLDATN QAVNSLSTST ASSVSSLSTG VSSLSTGLSS
ANSAITSLST SASTGISSLS TGLSSTNSAV TSLSTSTSTG LSSANSAITS LSTSTSTGIS
SLSTGLSSTN SSVTSLSTST STGLSSANSA ITSLSTSAST GISSLSTGLS STNSSVTSLS
TSTSTGLSSA NSAITSLSTS TSTGISSLST GLSSTNSSVT SLSTSTSTGL SSANSAITSL
STSTSTGIGS LSTGLSSTNS SVTSLSTSTS TGLSSANSAI TSLSTSTSTG ISSLSTGLSS
TNSSVTSLST STSTGISSLS TGLSSTNSAV TSLSTSTSTG LSSANSSIAS LSTSTSTGIS
SLSTGLSSTN SAVSSLSTST STGLSSTNST ITSLSSSAST GLSSTNSSVA SLSTSTSTAV
GSLSTGLSST NSAVTSLSTS TSTGISSLST GLSSTNSAVT SLSTSTSTAV GSLSTGLSST
NSSVTSLSTS TSTAVGSLST GLSSTNSSVT SLSTSTSTAV GSLSTGLSST NSAVTSLSTS
TSTAVGSLST GLSSTNSSVT SLSTSTSTAV GSLSTGLSST NSSVTSLSTS TSTAVGSLST
GLSTTNSTVT SLSTSTSTSI NSLSTGLSST NSAVMSLSTS TSTAVGSLST GLSTTNSNVT
SLSTATSTSI GSLSTGLSST TSSIASLSTS TSTTVGSLST GLSSTNSNLT SLSTATSTGI
GSLSTGLSSI ANNNTNLGNS TAGAIGGGAT YDPTTGKISA PSYVTYNSDG STTINNNVGS
AIDNINAHGI KYFHANSTAP DSQALGVDSV AIGPNAISKV DGSIALGSGS VSDRATTPAS
GIIRNGTASI PFNTTDQTLL GAVSVGDATS KTYRQITNVA DGTGQQDAVT VRQLTGALQS
FAVTGQKYFH ANSTAADSLS VGAESVAVGP TTVVNGDNGV GIGNGAIVDQ TAPGGVAIGQ
AASVAQADAI ALGSGATALG AQSVAQGANA KAVSVGSVAL GSGALGNATD ALALGAGASA
TFANSVALGA GSLTTVGALT NYVAYGLSSP QSSAGEVNIG NRQITGLAAG KNGTDAVNVS
QLDSVANQLT TLIDQRTTNL GGQYTTNPNG TNVPPGSTGP NSSAGGSGAV ASGSNSTAVG
NNSLASGNGS TAIGVGSTAS GNNSAAIGTG SNDGGRSNVV AVGSTESARQ VVNVAAGTQG
TDAVNVNQLN AVSNQFTQSL NTVNNQLTQM QQQIQQTDSM AREGIAATAA MASIPHMDRD
SNFAMGVGTA TFQGQKAMAV GVQARVTENL KATLNGGFAG SQRVVGAGML YQWK
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