Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_C7034 |
Symbol | |
ID | 3734486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007509 |
Strand | - |
Start bp | 599116 |
End bp | 602508 |
Gene Length | 3393 bp |
Protein Length | 1130 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637760736 |
Product | Alpha amylase like protein |
Protein accession | YP_366723 |
Protein GI | 78060148 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.673665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCCA CGCCGATCTT CGCTCCGCAT ATCCAGTTCT GCGACGCCCG CCTCGTCGGG CCGCTCGACG CATGGCCGCA GACGTTCGCC CAGGTCGCCG GCATGGGCTT CGATCACGTG CTGGTCGGCG CGTTCTGGGC CGCGAGCGTC GCCGGCTTTC CGCGCCACGT GGCCGATTTC CACCGGCCGG CCCAATCGTT CGCGACACGC GCGAGCGCGC TCGAAACCTT CTCGCGGCTC GCGCAGCTCG CGCAGGGCCA CGGGCTGCGC CTGCTGCTCG AAGTCGTACC GGATCGCGTC GCGCGCGAGA ATCCGCTGCG TGCCGAGCAT CCGGACTGGT ACGTCGAGCG CACGCACGAC GACGCGCTGA TCGATCCGCG CGGCACCGCG CACGCGCAGG ATGTCGCCCA CGCGAACCCC GGCGACGACG CGGCGCGCGA CGCGCTGTCC GCGTGGTGGT GCAAGCACCT CGCCGCGTTC GCCGATGCGG GCGCGGCCGG CTTCCTGATC GACGCGCCGC ATCATCTGCC GGCCGACTGG TGGCCTGGCT GGCGCGCGGC GCTGCGCCGT GCGCGCCCGG ACGTCGCGGT GCTCGCCAAC GTGCCCGGCC ATGCGCGCGA TGCGCTCGCG CAGCTCGAAG GCACCGGGTT CGACGCCGTG TTTTCATCGG TGCGCTGGTG GGACCTGCGC GCCCCGTGGT TCGTCGACGA ACACCGGCTG CTGCGGCGCA TCGGCTCGCC AATCGCGTTT CCCGACGCGT TCGACGGCAC GCGCCTCGCC GACGACTGGC CCGACGCGCC GGACGACACC GTCGCCCGCG CGTATCGCCG TGCACTCTGG ACGGCCGCGG CCGTCGGCAC CGGCTGGCTC GTGCCGATGG GCTTCGAGCG TGGCGTCACG GTGCCGCTGA TGGCGCGCGA CGCCGATGCG GCGCGCTATC GCGCCGCGTT CGAGCGCGCG CGCTTCGACC TGTCGGGCGC GATCGCCGAT GCGAACGCGT GGCGCCGCGC CACGCCCGTC GCGGCCGCGC GCGGCGAAAT CGTGCAGTTG AGCGCGCCTG GCGCAGCGGC GACCGCGCTG CTGCGCGGCA CCGGGCCGTC GCTCGAACAC GACGAAGCGG CCCTGCTGAT TGCGTTGAAT CCCGATCTCG ACGCAGCGGT GACGGTCGAC CCCGCGACGA TCCTGCCCGG CGTGCCGGGC GGATTCACGC GCGTCGCCAC GCCCGACGCT GCGCAAACCC ACCCGCCAGC CGCGCTCGAA CCATTCACGC TCGAGCCCGG TGCCTACGCG CTGCTACATG CATGGCAGGC GCCGCCCGTC ACGACCCGCG GCGACGCCGC CCACGAGCGC GCTGCGCTGT CCGCGGCGCT CGCGGCCGAA CGGATCGCGA TCGAACGCGT CGAGCCGTCG GTCGATGGCG GCCGCTTCGC GGTCAAGCGC GTGATCGGCG AGACGCTCGT CGTCCACGCG TCGATCTTCA CCGACGGGCA CGCGCATCTC GCGGCGGCGC TGCAATGGCG CGCTGCCGGC GACGACGACT GGCGCGAAAT CCCGTTCGAA GCCGAACCGA ACGACGGCTG GCACGCGCGC GTCGCGCTCG ACCGGCTCGG CCGCCATGAG TTTCGCGTGC TCGCGTGGCG CGACGACTGG GCGTCGCTCG TCCACGATGT CGCGAAGAAA CACGCGGCCG GCCAGGACGT GACGCTCGAA CTGCGCGAAG CGCAGCTGCT GCTCGCGACC GCGCTCAAGC TCGCCGATCC GCTCGATGCG CGCGCGCTCA CGCAGATGAA ACAACTGGTC GCCGAATTCA AGGACGCGCC GGCCGACGCG CGGCTCGCGC AGCTCGGCGC GGCGCCGCTT GCCGATGCGT TCGCGGCGCT GCGCTATCGC CCGTTCGTCA CGCACGACGA AACGACCTTC CCGGTCGACG TCGAGCGTCG CGCGGCGCGC TTCTCCAGCT GGTACGAGAT GTTTCCGCGC TCGGCCAGCG ACGATCCACA CCGGCACGGC ACGTTCGACG ATGTGATCGC GCACCTGCCG CGCATCCGCG ACATGGGTTT CGACGTGCTG TATTTCCCGC CGATCCACCC GATCGGGACG ACCGCGCGCA AGGGGCGCAA CAACAGCCTG AAGGCCGGCC CTGACGACGT CGGCAGCCCG TACGCGATCG GCTCGCCGGA CGGCGGCCAC ACGGCCGTGC ATCCGCAGCT CGGCACGCTC GATGCGTTTC GCGCGCTAGT CGATGCCGCG CGCGGCCACG GGCTCGAGAT CGCGCTTGAT TTCGCGATCC AGTGCTCGCC CGACCATCCG TGGCTCGCCG CGCATCCGGG CTGGTTCGCG TGGCGGCCGG ACGGCTCGCT GCGCTTCGCG GAAAATCCGC CGAAGCGCTA CCAGGACATC GTGAACCCCG ATTTCTACGC GCCGGACGCG CTGCCCGACC TGTGGCTCGC GTTGCGCGAT GCCGTGCTGT TCTGGGTCGA CGCCGGCGTG CGGATCTTCC GCGTCGACAA TCCGCACACG AAGCCGCTGC CGTTCTGGGC GTGGATGATC GACAACGTGC GCGGCCGGCA TCCGGATGTC GTGTTCCTGT CCGAAGCGTT CACGCGGCCG GGGATGATGG TTCGCCTCGC GAAGGTCGGC TTCTCGCAGT CGTACACGTA CTTCACGTGG CGCGAATCGA AGCGCGAATT CATCGACTAC CTGACCGAGC TGACGACCGG CCCCGCACGC GAATTCTTCC GGCCGAACTT CTTCGTCAAC ACGCCCGACA TCAACCCGCG CCACCTGCAG AACGCGCCGC GCACGCAGTT CGTGATCCGC GCGGCGCTCG CGGCGACGCT GGCCGGCTCA TGGGGCCTGT ATTCGGGCTT CGAGCTCGGC GAATCGGCGC CGCTGCCCGA CAGCGAGGAA TACGCGAACG CGGAGAAGTA CGAGCTGCGT GCACGCGACT GGAGCAAGGC CGCGCATATC GGCGCCGAGG TCGCGCGGCT GAACCGCGCG CGCCGCGCCC ATCCGGCGCT GCAGACGCAT CTCGGCCTCA CGTTCGCCGA TGCGGACAAC GACACGGTGC TCGTGTTCGT GAAGGCGACG CCGGCGTTCG ACAGCGTGGT CGTCGTCGCG ATCAGCACCG ACCCGTGGCA TCCGCAGGTC GCGAACTTCA CGCTCGATGC GTCGCTGTGG CGCGGCTTCG GGCTTGTCGA CGGCGAACCG CTCGACGCGC TCGAACAGGA CGCCACGCAT GCGGAAACCT GGCGCGGGCA TCGCCAGTAC GTGTCGCTCG ATCCGCATGT GCGCCCGTAT GCAATCTGGC GGGTCACGCC GTCTCCAGGC GCCGCGCGGG CGGCGGCGCG CGAACCGGGC GATGCCCGGT CACCTTCGGG AGGGCACGGA TGA
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Protein sequence | MDSTPIFAPH IQFCDARLVG PLDAWPQTFA QVAGMGFDHV LVGAFWAASV AGFPRHVADF HRPAQSFATR ASALETFSRL AQLAQGHGLR LLLEVVPDRV ARENPLRAEH PDWYVERTHD DALIDPRGTA HAQDVAHANP GDDAARDALS AWWCKHLAAF ADAGAAGFLI DAPHHLPADW WPGWRAALRR ARPDVAVLAN VPGHARDALA QLEGTGFDAV FSSVRWWDLR APWFVDEHRL LRRIGSPIAF PDAFDGTRLA DDWPDAPDDT VARAYRRALW TAAAVGTGWL VPMGFERGVT VPLMARDADA ARYRAAFERA RFDLSGAIAD ANAWRRATPV AAARGEIVQL SAPGAAATAL LRGTGPSLEH DEAALLIALN PDLDAAVTVD PATILPGVPG GFTRVATPDA AQTHPPAALE PFTLEPGAYA LLHAWQAPPV TTRGDAAHER AALSAALAAE RIAIERVEPS VDGGRFAVKR VIGETLVVHA SIFTDGHAHL AAALQWRAAG DDDWREIPFE AEPNDGWHAR VALDRLGRHE FRVLAWRDDW ASLVHDVAKK HAAGQDVTLE LREAQLLLAT ALKLADPLDA RALTQMKQLV AEFKDAPADA RLAQLGAAPL ADAFAALRYR PFVTHDETTF PVDVERRAAR FSSWYEMFPR SASDDPHRHG TFDDVIAHLP RIRDMGFDVL YFPPIHPIGT TARKGRNNSL KAGPDDVGSP YAIGSPDGGH TAVHPQLGTL DAFRALVDAA RGHGLEIALD FAIQCSPDHP WLAAHPGWFA WRPDGSLRFA ENPPKRYQDI VNPDFYAPDA LPDLWLALRD AVLFWVDAGV RIFRVDNPHT KPLPFWAWMI DNVRGRHPDV VFLSEAFTRP GMMVRLAKVG FSQSYTYFTW RESKREFIDY LTELTTGPAR EFFRPNFFVN TPDINPRHLQ NAPRTQFVIR AALAATLAGS WGLYSGFELG ESAPLPDSEE YANAEKYELR ARDWSKAAHI GAEVARLNRA RRAHPALQTH LGLTFADADN DTVLVFVKAT PAFDSVVVVA ISTDPWHPQV ANFTLDASLW RGFGLVDGEP LDALEQDATH AETWRGHRQY VSLDPHVRPY AIWRVTPSPG AARAAAREPG DARSPSGGHG
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