| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C7019 |
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| Symbol | |
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| ID | 3734460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007509 |
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| Strand | + |
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| Start bp | 578414 |
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| End bp | 579874 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637760722 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_366709 |
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| Protein GI | 78060134 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.50947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCT CGCTTTCGCT GCAGATGCGA CAGCATCTTG CACTTACGCC GAGGCTTCAG
CAGTCGCTGC GGTTGCTGCA GTTGTCCTCG CTCGAATTTC AACAGGAATT GCGTCAGGCG
CTCGATCAGA ATCCGTTTCT CGACGACGGC CAGGGTGACG AGGAGCCTGC CGCCGACGCA
CCGGGGCCGC AAGCCGAAGC CGCCGCGCCC GACGCGGTGC CCCCGGCTGA CGAGGTTCGC
CAGCCGGACG GCGACGTGCC TGAAGTGCCC GAGGTGTCCG AAGTGTCGTT GACGGCCGCG
CCCGCGACGC GCGGCACGAG CCGCCAGGGC GACGAGTCGG GCGGCCTGTC GCCCGGCGAA
TGGCTGGCTG CGGAACCGTC GCTGCATCAG CAACTGCATG ACGCGTTGCG GCTCTATCAG
CTGAACCGGC GCGACCGCGA GGCCGCGCGC ATCGTGATCG ACGCGCTCGA CGACGACGGC
TACCTGCGCC AGGAGCTGGT CGAACTGCTG GTCGCGGCCG ACCCCGCGCT GCTGTTGTCG
GAGCAGGATC TCGCGGTCGC GCTAAGGCTC GTGCAGATGC TCGACCGGCC CGGCATGGCC
GCGCGCTCGC TGTCCGAGTG TCTCGTGCTG CAACTCGACG CGATTCCGGC CGGCACGACG
GCGCTCGCGG AAGCGAAAGC GATCGCACGC GAGCATCTCG AACGGCTCGC GCGCCGCGAG
ACGGCCGAGA TCCAGCGGCG GATCGGCTGC AACCCGCAGA CGCTGCAGGC CGCGTGCGCG
CTGGTGCGCG GGCTCGACCC GCGCCCCGGC AATCATTACG GCAGCACGCG CGGCGACTAC
GTGGTGCCCG ACGTGATCGT GCGCCAGGTG CGCGACGACT GGATCGTGAC GATCAACCCG
GCCGTGCTGC CGCGCGCACG GTTGCACGAA CGCTACGCGA CGCTGTTCGC GCAGTCGAGC
GGCGAACGCG ATTCGCCGCT CGGCCAGCAG TTGCAGGAAG CGCGCTGGCT GATCCGCAAC
GTGCAGAAGC GCTTCGACAC GATCCAGCGC GTCGGCGAAT GCATCGTCGC GCGACAGCGC
GATTTCTTCC GCTATGGCGA GATCGCGATG AAGCCGCTCG TGCTGCGCGA CATCGCCGAG
GAGCTCGACC TGCACGAATC GACCGTGTCG CGCGCGACGG GCAACAAGTA CATGGCCACG
CCGCATGGCA CGTTCGAGTT CAAGCATTTC TTCCCGCGCA AGCTTGAGGC GGCCGGCAAG
GGCGTGTGTT CCGCGGCGGC CGCGAAGGTG CTGATCCGCG ACATGATCGC GGCCGAGCGG
CACACCGATC CGCTGTCCGA TGTTGCGCTC GCGCACAACC TCGCGGGCCG CGGCATCCTG
CTTGCGCGTC GCACGGTGAC GAAGTATCGC CAGGCGATGA AGATTCCGCC GGCCGACCTG
CGGCGCCGCG ACACCGCATG A
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| Protein sequence | MSVSLSLQMR QHLALTPRLQ QSLRLLQLSS LEFQQELRQA LDQNPFLDDG QGDEEPAADA
PGPQAEAAAP DAVPPADEVR QPDGDVPEVP EVSEVSLTAA PATRGTSRQG DESGGLSPGE
WLAAEPSLHQ QLHDALRLYQ LNRRDREAAR IVIDALDDDG YLRQELVELL VAADPALLLS
EQDLAVALRL VQMLDRPGMA ARSLSECLVL QLDAIPAGTT ALAEAKAIAR EHLERLARRE
TAEIQRRIGC NPQTLQAACA LVRGLDPRPG NHYGSTRGDY VVPDVIVRQV RDDWIVTINP
AVLPRARLHE RYATLFAQSS GERDSPLGQQ LQEARWLIRN VQKRFDTIQR VGECIVARQR
DFFRYGEIAM KPLVLRDIAE ELDLHESTVS RATGNKYMAT PHGTFEFKHF FPRKLEAAGK
GVCSAAAAKV LIRDMIAAER HTDPLSDVAL AHNLAGRGIL LARRTVTKYR QAMKIPPADL
RRRDTA
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