Gene Bcep18194_C6892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C6892 
Symbol 
ID3734256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp446341 
End bp447432 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content63% 
IMG OID637760595 
ProductSel1 repeat-containing protein 
Protein accessionYP_366582 
Protein GI78060007 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.844239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCT ATCTCGCCGT ATTAGCGATC CTCTGCCTGA CGGCATGTCA GGCCGGAGGG 
CAGGCCGCCG CACCGGCGAG CGTCGAGACA TCGGTCGGAC TGCAAACGAA AGAGGAAGCG
GTACGCGATA ACCCGGCAAA CCCGCACGAA AAGGATGAAA CCGGCGTGAC GGCCAGCGAT
GTCTCGTCAT CGTCTACCTC TTCGCAGAAG TCGCTGGCGC AGCTCGTCGA CGCGTGTCAC
GCGACCGATC CGGACAGTTG CGAGAAGGCC GGTTTGGGCT ATGCCGCGGC CGCGACCGAC
AACCTCCTGC ATGCAGCGGA CTTTTACGCG GACGGCTGCG ACCAGTCGAA TGCCTCGAAC
TGCATTCGAA TGGGGCTCAT GCTCCAGAAA GGTGACGGTG TGCAACTGGA CTGGTTCGCC
GCAGCGATAA ACTTCAGATC GGCCTGCGAC CTCGACGACA CGGAGTGTTC GAATCTCGGC
CTGGCTTATG TCTTCGGCCA GGGGGTGGTG CGGGACGGCA GGCGAGCCGT GCAACTATTC
GACAAGGCGT GCCAGGCAGG CCGTATGACG GGGTGCGCGA ATCTCGGGGC GGCCTATATG
AAAGGGATCG GCGTGCACCG GGATCGCCAG CGTGCAATCG CGTTGTTCAG GGAGGCATGC
AGCGACGGCG ATTCGCTCGG CTGTTTCAAC CTCGGGGTGA TATACCACAC GGGGCAAGGC
GTCCGGCGTG ATCTGAAGCG GGCGGCGACT TACTACCAGA CCGCATGCGA TCACGACGAC
GGTGAATCGT GCAGCAATCT CGGGAAATTG CGACTCGGCC GGAAAATCGG CGCGCGTGAC
CCGAAAACCG CGGCACAGCT GTTCTATCGG GGCTGCATAC TGAACGACGC CGAAAGCTGT
CTGTATCTCG GTCTGGCCCA TCAGTCGGGC GACGGCGTCC GTGCGAATGC CTACGACACG
CGGAGCTATC TGTGGCGCGC GGTTGCGCTC GATCCGAAGT CGCAGGCCGC GCGACGTGCG
CTTGCCCGTC TCGCTCGCAT TGGAGATGAA CGCGCGGCGA CACCCGCAGG CAGGCAACCT
TCCGGAGAAT GA
 
Protein sequence
MKSYLAVLAI LCLTACQAGG QAAAPASVET SVGLQTKEEA VRDNPANPHE KDETGVTASD 
VSSSSTSSQK SLAQLVDACH ATDPDSCEKA GLGYAAAATD NLLHAADFYA DGCDQSNASN
CIRMGLMLQK GDGVQLDWFA AAINFRSACD LDDTECSNLG LAYVFGQGVV RDGRRAVQLF
DKACQAGRMT GCANLGAAYM KGIGVHRDRQ RAIALFREAC SDGDSLGCFN LGVIYHTGQG
VRRDLKRAAT YYQTACDHDD GESCSNLGKL RLGRKIGARD PKTAAQLFYR GCILNDAESC
LYLGLAHQSG DGVRANAYDT RSYLWRAVAL DPKSQAARRA LARLARIGDE RAATPAGRQP
SGE