Gene Bcep18194_C6588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C6588 
Symbol 
ID3733905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp73651 
End bp74262 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID637760290 
Productsigma-24 (FecI-like) 
Protein accessionYP_366282 
Protein GI78059707 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0137066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CGCCGGATAG TGCCGAGCGC TTTGGCTCGT CAGCCCCTTC GCACGATGGC 
GACGCCGATG CCGCGCGTCG TGCGCATCTG AATCAAGTCA TGCTGCAGGT CGCGCGAGGC
GATCAGGCGG CGTTCGCCGA GCTGTACCGG CTGACGTCGT CACGCGTTTT CGGTATCGTC
ATCCGCATGC TCCACGATCA GGGTGAGGCG GAGGATCTGC TCCAGGAGGT CTACGCCACC
GCGTGGCGCC GCGCCGATAC ATTCGACCCC GTACGCGGTG GAGCAATGAC CTGGCTCATC
GCGCTGGCGC GCAACCGGAC GATCGATCGG TTGCGGCAGC ATCGCGAGGT GCCGCTTGAC
GAGGAACAGG TGCTCGACCT TCCCGACGAG GCCCCGACGC CCGCCGCGCT GGCGGAAGCA
AGCCAGGAGC GGCAGCGCCT CGAGCGCTGC CTGGAATGGC TCGAGCCGCC CCAGCGCCGC
GCAGTGCGTG AAGCCTTTTT CAGCGGTGCG ACCTACAGTG AGTTGGCGGT GCGACTGCGT
GTACCGCTTG GAACCATGAA AAGCTGGATC CGGCGTAGCC TGATGCAGTT GAAGGAATGT
CTGGAGCAAT GA
 
Protein sequence
MNDTPDSAER FGSSAPSHDG DADAARRAHL NQVMLQVARG DQAAFAELYR LTSSRVFGIV 
IRMLHDQGEA EDLLQEVYAT AWRRADTFDP VRGGAMTWLI ALARNRTIDR LRQHREVPLD
EEQVLDLPDE APTPAALAEA SQERQRLERC LEWLEPPQRR AVREAFFSGA TYSELAVRLR
VPLGTMKSWI RRSLMQLKEC LEQ