Gene Bcep18194_B2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B2170 
Symbol 
ID3753935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp2485650 
End bp2486756 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID637767016 
Productspermidine/putrescine ABC transporter ATPase 
Protein accessionYP_372925 
Protein GI78063017 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0794001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCCG ATGATGTGAT CGTCAGCTTT CGCGGCGTGC GGAAGACCTA CGACGGCGAA 
ACGCTGGTCG TCAAATCGCT CGACCTCGAT ATCCACCGCG GGGAATTCCT GACGCTGCTC
GGGCCGTCGG GCTCGGGCAA GACCACCTGC CTGATGATGC TGGCCGGCTT CGAATTCCCG
ACCGGCGGCG AGATCCGCCT CGACGGCGAA CTGCTGAACA ACGTGCCGCC GCACAAGCGC
AACATCGGCA TGGTGTTCCA GAACTACGCG CTGTTTCCGC ACCTGACGGT CGAGCAGAAC
GTCGCGTATC CGCTGACCGT GCGCAAGCTG CCGGCCGGCG AGCGCGCGGA ACGCGTCGCG
CATGCGCTGA AGATGGTACA GATGGAGCGC TTCGCGAAAC GCTACCCGGC CCAGTTGTCG
GGCGGCCAGC AGCAGCGCAT CGCGCTGGCG CGCGCGCTCG TGTTCGAGCC GAAGCTGGTG
CTGATGGACG AGCCGCTCGG CGCGCTCGAC AAGCAACTGC GCGAACACAT GCAGTACGAA
CTGAAGGCGC TGCACGAAAA GCTCGGCGTA ACTTTCGTGT ACGTGACGCA CGACCAGGGC
GAGGCGCTGA CGATGTCCGA TCGCGTCGCC GTGTTCGACA AGGGCATCGT GCAGCAGCTC
GACACCGTCG ACCGCCTGTA CGAATCGCCC TGCAACGAAT TCGTCGCGAA CTTCATCGGC
GACAGCAACC GGCTGCGCGG CACCATCGCG CGCGTCGACG GCGAATTCTG CGAATTCCGG
CTCGACGACG GCACGAAGCT CGTCGGCCGC CGCATCGGCG ATGCGGCCGA GGGGGCGCCG
GCTGTCGCGT GCATCCGCCC CGAACGCATG AGCCTCGCCG CGCACGGCGC GAACGGGCAC
GCGAACGGCT CGGCCGCCAA CCGGTTGAGC GGCGAGGCGC GCAGCCTCAT CTATTTCGGC
GATCACGTGC GCATGCGCTG TGCGCTGCCC GGCCAGGACG AATGCTTCGT GAAGGTGCCG
CTCGGCACCG GCGCGATCGA TGCGTTCTCG CCCGGCGCAC CGGTCGCGCT CGCATTTGCA
CCCGAACACC TGCGCGTGTT CGCTTGA
 
Protein sequence
MKSDDVIVSF RGVRKTYDGE TLVVKSLDLD IHRGEFLTLL GPSGSGKTTC LMMLAGFEFP 
TGGEIRLDGE LLNNVPPHKR NIGMVFQNYA LFPHLTVEQN VAYPLTVRKL PAGERAERVA
HALKMVQMER FAKRYPAQLS GGQQQRIALA RALVFEPKLV LMDEPLGALD KQLREHMQYE
LKALHEKLGV TFVYVTHDQG EALTMSDRVA VFDKGIVQQL DTVDRLYESP CNEFVANFIG
DSNRLRGTIA RVDGEFCEFR LDDGTKLVGR RIGDAAEGAP AVACIRPERM SLAAHGANGH
ANGSAANRLS GEARSLIYFG DHVRMRCALP GQDECFVKVP LGTGAIDAFS PGAPVALAFA
PEHLRVFA