| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2157 |
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| Symbol | prpD |
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| ID | 3753922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | + |
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| Start bp | 2470154 |
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| End bp | 2471605 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637767003 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_372912 |
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| Protein GI | 78063004 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCC CGGTCTCCAA CGTCCGCCCT GCTCCGGATA CGGTACTCGT CGATATCGTC
GACTACGTGC TGAATGCCGG CATCGACAGC GCGCTCGCGC TGGAGACGGC GCGTCATTGC
CTGATCGACA CGCTCGGATG TGGACTCGAG GCGCTGTCCT ACCCTGCCTG CACCAAGCTG
CTTGGCCCCG TCGTGCCGGG CACGATCGTG CCGAACGGCG CGAAGGTGCC CGGCACGTCC
TTCCAGCTCG ATCCCGTCCA GGCCGCATTC GGCATCGGCG CGATGATCCG CTGGCTGGAC
TTCAACGACA CCTGGCTCGC CGCCGAATGG GGTCATCCGT CCGACAATCT CGGCGGGATC
CTGGCGACGG CCGACTGGCT TTCCCGCACG GCCGTCGCGG CCGGCCGGAA GCCGCTCACG
ATGCGCGACG TGCTGGTCGC GATGATCCAG GCCCACGAGA TCCAGGGCTG CCTCGCTCTC
GAGAATTCGT TCAATGCGGT CGGGCTCGAC CACGTGCTGC TCGTGAAGGT CGCATCGACG
GCCGTCGTCG GCCGGCTGCT CGGGCTCACG CGCGACGAGC TGATCAACGC GGTGTCCAAC
GCGTTCGTCG ACGGCCAGGC GCTGCGCACC TACCGCCACG CGCCGAATAC GGGCTCGCGC
AAATCATGGG CGGCGGGCGA CGCCACATCC CGCGCGGTGC GCCTCGCGCT GATCGCGAAA
ACGGGTGAAA TGGGCTACCC GTCGGCGCTC ACCGCAAAAA CCTGGGGCTT CTACGACGTG
CTGTTCGACG GCAAGCCGTT CCGCTTCCAG CGCCCGTACG GCACGTACGT GATGGAAAAC
GTGCTGTTCA AGATCGCATT CCCCGCCGAA TTCCACGCGC AAACGGCCGC CGAGGCCGCG
CTGCAGCTGC ACGCGCAGCT CGCCGCCGCG GGCCGCACGA CCGACGACAT CAGCCGGATC
ACGATCCGCA CGCACGCGGC CGCGATCCGC ATCATCGACA AGCAGGGCCC GCTCGCCAAT
CCGGCCGACC GCGACCACTG CATCCAGTAC ATGGTCGCCG TGCCGCTGCT GTTCGGCCGG
CTGACCGCGG CCGACTACGA AGATTCGGCC GCCGCCGATC CCCGCATCGA CGCGCTGCGC
GCGAAAACCG TGTGCGTCGA GGATCCGCAG TTCACGAAGG ATTACCACGA CCCGGACAAG
CGCTCGATCG CGAATGCACT GACGATCGAG TTCACGGACG GGTCGAAGCT TGCCGAGGTG
GCGGTCGAAT ACCCGCTCGG TCACCGGCGG CGCCGGACCG AAGGCGTCCC GCTCCTGGTC
GAGAAGTTCA GGACCAACCT TGCCCGCCGC TTCCCGGCAA AGCAGCAACA AGCGATTCTC
GACGTGTCGC TGGACCAGGC AAAGCTCGAA GCAATGCCGG TCGATGAGTA CGTCGATCTG
TATGTGATAT AG
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| Protein sequence | MSAPVSNVRP APDTVLVDIV DYVLNAGIDS ALALETARHC LIDTLGCGLE ALSYPACTKL
LGPVVPGTIV PNGAKVPGTS FQLDPVQAAF GIGAMIRWLD FNDTWLAAEW GHPSDNLGGI
LATADWLSRT AVAAGRKPLT MRDVLVAMIQ AHEIQGCLAL ENSFNAVGLD HVLLVKVAST
AVVGRLLGLT RDELINAVSN AFVDGQALRT YRHAPNTGSR KSWAAGDATS RAVRLALIAK
TGEMGYPSAL TAKTWGFYDV LFDGKPFRFQ RPYGTYVMEN VLFKIAFPAE FHAQTAAEAA
LQLHAQLAAA GRTTDDISRI TIRTHAAAIR IIDKQGPLAN PADRDHCIQY MVAVPLLFGR
LTAADYEDSA AADPRIDALR AKTVCVEDPQ FTKDYHDPDK RSIANALTIE FTDGSKLAEV
AVEYPLGHRR RRTEGVPLLV EKFRTNLARR FPAKQQQAIL DVSLDQAKLE AMPVDEYVDL
YVI
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