| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2042 |
|---|
| Symbol | |
|---|
| ID | 3753807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 2339624 |
|---|
| End bp | 2340565 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637766890 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_372799 |
|---|
| Protein GI | 78062891 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00987949 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.16087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGA CGATCGAGAT TCTGTTGCCC GTGTTCGGGC TGATCGCGGC AGGGTTCCTG
TGCCGCCGGC GCGGCGTACT CGGGCCGGCG GCGGCCTCGG AACTCAACCG CTTCGTCGTG
TGGCTCGCGC TGCCCGCGCT GCTGTTCCAG ATCATGGCGC ATGCGTCGTG GCACCAGCTG
TATCAGCCGG CCTTCGTTGC CACGTTCGCG CTGACCTGTG CGCTCGTTTT CGTCGGCGTG
CTCGCATGGC GCCTGCTCGC GGGGCGCGGG CTCGCCGATG CGAGCATCGA CGCGATCGCC
GCGTCGTACC CGAACACCGG GTATCTCGGC TTCCCGCTGT GCCTGCTCGC GTTCGGCACC
GACAGCCTCA CGCCAACCAC GATCGCGACC ATTCTCGTAG CGTGCGTGTT GTTTGCGGGC
GCGATCGTGC TGATCGAGAT CGGGCTGCAG CGCGACCGCG CGCCGCTGAA ACTGATGTGG
AAAGTCGTCG GCGCGCTGCT GCGCAACCCG CTGATCGTCG CGCCGCTGGC CGGTGTTTGC
GTGTCGGCCG CGCAGGTGCC GCTCGGTGCG CCGGTCGATA CGTTCCTGAA GCTGCTCGGC
GGGGCCGCGA GCCCGTGCGC GCTCGTCAGC CTCGGGCTGT TTCTCGCGGA GAAGCGGGAG
GCGTCCGGTG CGGCGCCGCG CGGCAGCGTT GCGCTGACCG CGGTGAAGCT GTTCGTGCAG
CCCGCGCTGG CGTGGTGGCT TGGCGTGCGT GTGTTCGCAC TGCCGCCGGT GCTTGCGCAG
ATCGCCGTCG TGCTCGCCGC GCTGCCCACC GGCACGGGGC CGTACATGCT GGCCGAGTTC
TACGGGCGCG AAGCCCAGGT GACGTCGCGC ACGATCCTGC TGTCGACGCT CGGGTCGATC
GTGTCGTTGT CGGTGCTGCT CGTGCTGGCA CGGCACGCCT GA
|
|---|
| Protein sequence | MSSTIEILLP VFGLIAAGFL CRRRGVLGPA AASELNRFVV WLALPALLFQ IMAHASWHQL
YQPAFVATFA LTCALVFVGV LAWRLLAGRG LADASIDAIA ASYPNTGYLG FPLCLLAFGT
DSLTPTTIAT ILVACVLFAG AIVLIEIGLQ RDRAPLKLMW KVVGALLRNP LIVAPLAGVC
VSAAQVPLGA PVDTFLKLLG GAASPCALVS LGLFLAEKRE ASGAAPRGSV ALTAVKLFVQ
PALAWWLGVR VFALPPVLAQ IAVVLAALPT GTGPYMLAEF YGREAQVTSR TILLSTLGSI
VSLSVLLVLA RHA
|
|---|
| |