| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2019 |
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| Symbol | |
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| ID | 3753784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | - |
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| Start bp | 2312518 |
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| End bp | 2314767 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637766867 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_372776 |
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| Protein GI | 78062868 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00647394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.691618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATACCG AACCGCAAAG TTCTCGTTAC AGTCTCGGGC TCGCGGCGGA AGTGCTCGCG
TCCGAGCAAA GCGTGCTGAG ACTGATCACG CGCAACACAC CGCTGCCGGA GCTGTTGGTC
GAAGTCTGCC GGCGTGCCGA GGCTTTGCTC GGCGACGGTG CGTCGTGCAC GATCCTGCTG
CTCGATACCG ACGGCGTGCA CGTGCACGTC GGCGCTGCGC CGTCGTTGCC CGCGCAGTAC
AGTGCGGCGA TCGAAGGCGC GTCCATCGGG CCCGTGGCCG GCTCGTGCGG CACGGCGATG
TACCTGCGCC GGATGGTCGT CGTCGAAGAC ATCGAAACCG ATCCCCTGTG GGCCAACTAC
CGGGCCGTTG CATTGCCGCT GGGCTTGCGC GCGTGCTGGT CGGTGCCGTT CCTCGACGAT
AGCGGCGCCG TGCTCGGCGC GTTCGCCGTC TATTACCGCA CGCAGCGCCG GCCGGGCGAC
GAGGAAACCG AACTGTTGCG CGACATCGGC AACAGCGTCG GCCTCGCGGT GCACCAGGAC
CGGATCGCGC GACAGCTCGC GCGCAGCGAG GAACATCACC GGCTCGTGGT CAACAGCCTG
CACGAAGGGA TCCTCGTCGT GTCGCGCGAC GGCGTCGTGG TCGCGAGCAA CCCGAGTGCG
AACCGGATGA TGCGCGTGAA GGGCGACCTC GTCGGCCGCC GGCTGTCGAC GGTGATCCTG
CGCAAGCTGC ACGAGGACGG CACGCCGATC GCGCCCGACG AATGGCCGAG CCGGCGCGCG
CTCGAGACGG CCACGCCGCT GCTCGACTAC ACGGTCGGCT TCGGCCTGGC GGACGGCGAC
ATCATCTGGG TGCGCGGCAA CGCGGTGCCG ATCGTGAGGC CGGGCGAGAA GCTGGCCGAC
TCGGTGATCG TGTCGTTCAA CGACATCGGC CCCGTGCGTG AAGCGCAGCA GCAGCTGCGC
TACCTGGCGA CGCGCGATGC GCTGACCGGC CTCTACAACC GCCGCTGGCT CGGCGACCGC
ATGCGCGAGC TGTTCGGCGG GCACGACGCG GCCGGCGGGC CCGCGCGCGT CGCGATCCTG
TTCATCGATC TCGTCGGCTT CAAGAAGGTC AACGACACGG CCGGCCACGA CGCGGGCGAT
GCGCTGCTGC GCAGCGTCGC CGCGCGGCTC GCGGCCTGCG GGGGCGGCCA GTACGCACTG
ACGCGCGTCG GCGGCGACGA GTTCGTGATC CTCGTCGACG ATTGCGACGA TCCCGACCGG
CTCGCGGTGC TCGCACGCGA GGTGATCGAC GCGATCGCGA AGCCGTTTGC GATCGCGAAC
AACGAATACT GGCTCGGCGT GTCGATCGGG ATCAGCGTCG CGCCGCGCGA CGGCGACGAT
GCCGTCACGC TGATGCGCAA CGCCGATTCG GCGATGTATG ACGCGAAGCA GCGCGGCCGC
AACCACTTCA CGTTCTTCAC CGCGCAGCTC AACCTGCGGC TGCAGCGCCG CTTCGCGATC
GAGCAGTCGC TGCGGCGCGC GCTGTCGTCG GACATGCTGC GGCTCGCATA TCAGCCCGTC
GTCGACGCGC GCAGCGGCCG CACGGTCGGC GCCGAGGCGT TGCTGCGCTG GACGAGCCCG
GAGCTCGGGC CGATGTCGCC GGCGGAGTTC ATTCCGGTCG CGGAAGATAC GGGGCTGATC
GTCGCGATCG GCCAGTGGGT GCTCGAAACC GCGTGCCGGC AGGCGGCCGA ATGGCGCCGC
ACGATCGCGC CCGACCTGAT GCTGGCCGTC AACCTGTCGC CGCGGCAGTT CCACGAAGGG
CTCGTCGAGT CGGTCGATCG CTGCCTCGCG CAGACGCAGC TCGATCCGTC CGCGCTCGAA
CTCGAGATTA CCGAAGGACT GCTGATGAAC GACACGGACA CCGTGCTGCC GATGCTCGAG
GCGCTCACGG ACATGAACGT GCGGATCTCG GTCGACGATT TCGGCACCGG CTATTCGTCG
CTCGCGTACC TGAAGCGCTT TCCGTTGCAC AACCTGAAGG TCGACCGCTC GTTCGTGTCG
GGCGTGCCCG ATCATCACGA TTCGGTGGCG ATCACGCAGG CCGTGGTCGC GATGGCACAT
TCGCTGGGGA TGAAGGTCAC GGCCGAAGGC GTCGAGACGC AGGCGCAGTC GTGGTTTTTG
CAGCAGATCG GCTGCGACAT GCAGCAGGGC TATCTGTTCA GCCGTCCGCT GGACCCGAAC
GACTACGCGC GCCGGCTCGG CGCCATGTGA
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| Protein sequence | MNTEPQSSRY SLGLAAEVLA SEQSVLRLIT RNTPLPELLV EVCRRAEALL GDGASCTILL
LDTDGVHVHV GAAPSLPAQY SAAIEGASIG PVAGSCGTAM YLRRMVVVED IETDPLWANY
RAVALPLGLR ACWSVPFLDD SGAVLGAFAV YYRTQRRPGD EETELLRDIG NSVGLAVHQD
RIARQLARSE EHHRLVVNSL HEGILVVSRD GVVVASNPSA NRMMRVKGDL VGRRLSTVIL
RKLHEDGTPI APDEWPSRRA LETATPLLDY TVGFGLADGD IIWVRGNAVP IVRPGEKLAD
SVIVSFNDIG PVREAQQQLR YLATRDALTG LYNRRWLGDR MRELFGGHDA AGGPARVAIL
FIDLVGFKKV NDTAGHDAGD ALLRSVAARL AACGGGQYAL TRVGGDEFVI LVDDCDDPDR
LAVLAREVID AIAKPFAIAN NEYWLGVSIG ISVAPRDGDD AVTLMRNADS AMYDAKQRGR
NHFTFFTAQL NLRLQRRFAI EQSLRRALSS DMLRLAYQPV VDARSGRTVG AEALLRWTSP
ELGPMSPAEF IPVAEDTGLI VAIGQWVLET ACRQAAEWRR TIAPDLMLAV NLSPRQFHEG
LVESVDRCLA QTQLDPSALE LEITEGLLMN DTDTVLPMLE ALTDMNVRIS VDDFGTGYSS
LAYLKRFPLH NLKVDRSFVS GVPDHHDSVA ITQAVVAMAH SLGMKVTAEG VETQAQSWFL
QQIGCDMQQG YLFSRPLDPN DYARRLGAM
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