Gene Bcep18194_B1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B1960 
SymbolglnP 
ID3753725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp2242856 
End bp2243512 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content62% 
IMG OID637766808 
Productglutamine ABC transporter permease protein 
Protein accessionYP_372717 
Protein GI78062809 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.120832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.914602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTTCG ATTGGTCGGC GATCTGGGCG GCGTTGCCGG ACCTGATGGA CGGGGTCCGG 
TTGACGGTGT TCATCGCATT TTTCGGGCTG GTGGGCGGCT TCATCGTCGG GATGATCGCG
GGCATGTTCC GCGCTTACGG ACCGAAGGCG ATGAACGTGC TTGCACAGGT TTATATTGAA
TTGATCCGCG GCACGCCGAT CGTCGTGCAG GTGATGTTCC TGTATTTCGC GCTGCCGTTG
CTCGCGCATA TCCGCATCGA CGGCCTGACG GCCGCGATCA TCGCGATCAC GGTGAATTCC
GGCGCGTATC TCGCGGAAGT AGTGCGCGGC GCGCTGCTGT CAATCCCGAA GGGGCTGACG
GAAGCGGGGC TCGCGATGGG CTTGTCGATG CCGCGGGTGC TGCTGAAGGT GGTCGGGCCG
CTCGCGTTCC GGCGCCTGAT TCCGCCGCTC GGCAACCAGT GCATCGTGAG CCTGAAGGAC
ACGTCGCTGT TCATCGTGAT CGGCGTCGGC GAACTGACGC GCAAGGGGCA GGAAATCATC
GCGGGCAATT TCCAGGCGGT CGAGATCTGG ACTGCGGTGG CTGTCATCTA CCTGTTGTTG
ACCGGCGCCA TGACGTTGAC GCTGCGGCTC GTCGAAAAGC GGATGAGGAT CCTATGA
 
Protein sequence
MNFDWSAIWA ALPDLMDGVR LTVFIAFFGL VGGFIVGMIA GMFRAYGPKA MNVLAQVYIE 
LIRGTPIVVQ VMFLYFALPL LAHIRIDGLT AAIIAITVNS GAYLAEVVRG ALLSIPKGLT
EAGLAMGLSM PRVLLKVVGP LAFRRLIPPL GNQCIVSLKD TSLFIVIGVG ELTRKGQEII
AGNFQAVEIW TAVAVIYLLL TGAMTLTLRL VEKRMRIL