Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B1828 |
Symbol | |
ID | 3753593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | - |
Start bp | 2092755 |
End bp | 2094674 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637766677 |
Product | hypothetical protein |
Protein accession | YP_372586 |
Protein GI | 78062678 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.221701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCGA GTGCTCTGTG CGGAATCTGG ATTGCGCTTG CCATGAACCC TCATCTCCTT GATGCCTACA ATCGGGAATT GCTCTATTTC AACGAGCTAA TGGAGGAGTT TGTCCATGCG CATCCCAAAA TTGCGCGTCG TCTGGGCATG CATGCCGGTG AGATTGCCGA TCCATTTGTC GAGCGTCTGG TGCAGGCAGC GAGTTTTACA ACCGCTCGAC TGCAATTGAA GCTGGATGCC GAATTTCCCC TGCTGACCAG CCGGCTACTC GAAACCATCT ATCCGAACTA CGTCGCCCCG ACGCCTTCGA TTGCGGTGGC GCGTCTCTAT CCCAATGAGC AGGAGGGCAA TTTGCTCGAG GGATTTTGCG TACCGCGTGA CACGGAGTTC GCGAGCCGCG TCCCGGACGG CGAACGCACG TCCTGCACCT TCCGTAGCGG TCTGGATGTG ATGTTGTATC CGTTGGAGAT CGTTTCGGCG AGGTTGATAG GGGTTCCACC GGATATTCCA TCGATAGAAC GGTATAGCGT CGCACACAAG CCCGTTCGCG GGGCGCTGCG TCTCAGGCTC CGGACTACGG GCGAAGCGCG ATTCGAAGAG TTGCGCGGCC TGGATCGATT GCCCGTCTAT CTGGCAGGCG ACGAAGGCGT CGCTTCACGG CTGTTCGAGT TGATCCATGC CGGCGCTGTG GCAACCGTGA CCGGAGTGCC GGACCGCTTC GCTGATCCGA ATCAAGCACG CGGGATTGTG TCCGCTCAGG CGGTCGAATA CACCGGGCTG GCTACCGACG AGAGTCTGCT GCCGTTGGCC GGGGCGAAGT TTCACGGCCA TAACCTGCTG CACGAATATG CGGCGTGCCC CGCGCGCTTC TGGTTTTTCG CGCTGGCGGG TCTGAATGCG GGATTGCGAC ACGTGACCGG TCGTGAAGCA GAAATCGTCA TATTGCTGGA TCGCTTCGAC AGTGCACTGG CCGAGCACGT CGACGCATCC CGCTTTGCAC TCTTCTGTAC ACCGGTCATC AACCTGTTTC GTCGCAAGAC CGATCCTGCC GAGATTCCGT GCACGGGCGG CGAAATCCTG TTGCAACCCG ACAGGCAGAA CGGTTCGGAC TATGAGGTGT TCGCGGTGGA AGCGCTGCAC GGCTTTGTGA GCAAAGGTGC GGCATCGCTC GAGTTCCGGC CGCTGTACCG GGCGCTGACG AACGATGAAA ACAATCACGG GCGCTACTTC ACGACGCGCC GCGAGCACGG AAGGGCGAAG GCGTCATATC GTCGCTATGG TGCTCGTACC ACGTACGTCG GGACGGATTT TTTCGTTTCG TTGGTCGATC AAAATGAGCA GTCCTATCCA CAGATCATGA AATATCTGGC GGTAGATGCG TGGCTGACGA ACTGCGATCT GCCGAGCCTG CTGGCGCCCA ATGGCGTCAC GGATCTGACT ATCGGGATCA GTGCCCCGTT AAGCAGTGCG GGGCTCATTC GTGCACCAAG CCCGGCACGC GCGCCGCTTG CTCAGCGGGA CATCGCATGG CGGCTGATCG GCCAGTTGAA TCTCGGCTAC GGCACCTTGG AGGCTGGTGA CGGGAGCGGA CTGCGCGACA TCCTTGCTTT GTTCGCTGCT GACGACGATG TGCGCTACCG CCGCCAGATC GACAGCCTGA TCCGCGTAGA TGCGCATCCC GTGACGAAGA AACTACCCGG CCAGAATCAG TTGCGATTCG GTCGAGGCAT CGAGTGCGTG CTGACGGTGG ATGAAACCGG CTTCGATGGC ATGAGCCCCT ATCTCTTCGG GGTGATCCTC GAGCATTACC TGGCGCGCCA CGTTTCGACA CATTCTTTTA CTCAATCCGT GTTGCGTTCG ACGCAGCGCG GCGAGTTGAT GCGCTGGCCG ATTCGAACAG GGACGCGCAG CGCACTCTGA
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Protein sequence | MLSSALCGIW IALAMNPHLL DAYNRELLYF NELMEEFVHA HPKIARRLGM HAGEIADPFV ERLVQAASFT TARLQLKLDA EFPLLTSRLL ETIYPNYVAP TPSIAVARLY PNEQEGNLLE GFCVPRDTEF ASRVPDGERT SCTFRSGLDV MLYPLEIVSA RLIGVPPDIP SIERYSVAHK PVRGALRLRL RTTGEARFEE LRGLDRLPVY LAGDEGVASR LFELIHAGAV ATVTGVPDRF ADPNQARGIV SAQAVEYTGL ATDESLLPLA GAKFHGHNLL HEYAACPARF WFFALAGLNA GLRHVTGREA EIVILLDRFD SALAEHVDAS RFALFCTPVI NLFRRKTDPA EIPCTGGEIL LQPDRQNGSD YEVFAVEALH GFVSKGAASL EFRPLYRALT NDENNHGRYF TTRREHGRAK ASYRRYGART TYVGTDFFVS LVDQNEQSYP QIMKYLAVDA WLTNCDLPSL LAPNGVTDLT IGISAPLSSA GLIRAPSPAR APLAQRDIAW RLIGQLNLGY GTLEAGDGSG LRDILALFAA DDDVRYRRQI DSLIRVDAHP VTKKLPGQNQ LRFGRGIECV LTVDETGFDG MSPYLFGVIL EHYLARHVST HSFTQSVLRS TQRGELMRWP IRTGTRSAL
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