Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B1793 |
Symbol | |
ID | 3753558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | - |
Start bp | 2036923 |
End bp | 2038701 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637766642 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_372551 |
Protein GI | 78062643 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.345818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.124135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCAG AGAAAAAACC GCATGTCGAT GCGGTGATCG TCGGCTTCGG CTGGACCGGC GCGATTCTCG CGAAGGAACT GACCGAAGCG GGCCTGAACG TCGTCGCGCT CGAGCGCGGC GAGTATCGCG ACACCTATCC GGACGGCGCG TATCCGAACA CGATCGACGA GCTGACCTAC AACATCCGCA AGAAGCTGTT CCTCGACCTG TCGAAGACGA CCGTGTCGAT CCGCCACGGC CTGCAGGACA CCGCGCTGCC GTACCGGCAG CTCGCCGCGT TCCTGCCGGG CGAAGGCGTG GGCGGTGCGG GGCTGCACTG GTCGGGCGTC CATTTCCGGA TCACGCCGGA AGAGCTGCGC TTGCGCAGCC ACTATGAAGA GCGCTACGGC AAGAAGTTCA TCCCCGAAGG GATGACGATC CAGGACACGG GCGTGACCTA CGAGGAGCTC GAGCCGCATT TCGACTTCGC CGAGAAGGTG TTCGGCACGT CGGGGCAGGC TTACAAGGTC GGCGGCAAGG TGGTCGGCGA CGGTAACGTG TTCGAAGCGA ACCGCAGCGA CAACTTCCCG CTGCCCGCGC AGCTCAACAC CTATTCGGCG CAGCGCTTCT CCGATGCGGC GAAGTCGCTC GGCCTGCATC CGTACCGGCT GCCGTCGGCG AACACGTCGG GCCCGTACAC GAACCCGTAC GGCGTGCAGA TGGGCCCGTG CAACTTCTGC GGCTACTGCA GCGGCTACGC GTGCTACATG TACTCGAAGG CGTCGCCGAA CCTGAACATC CTGCCCGCGC TGAAGCAGGC GCCGAACTTC GAGCTGCGCT CGAAGTGCCA CGTGCTGCGC GTCGACCTCG ACGACACGAA GAAGCGCGCG ACGGGCGTGA CCTACGTCGA CCCGGCCGGG CGTGAAGTGC ACCAGCCGGC CGATCTCGTG ATCGTGGCCG CGTTCCAGTA CCACAACGTG CACCTGCTGC TGCTGTCGGG TATCGGCAAG CCGTACGACC CGATCTCGGG CGAAGGCGTC GTGGGCCGCA ATTTCGCGTA CCAGAACCTG TCGACGATCA AGGCGTTCTT CGACAAGGAT ACCTACACGA ATCCGTTCAT CGGCGCGGGC GGCAATGGCG TCGCGGTGGA CGATTTCAAC GCGGACAACT TCGACCATGG CCCGCTCGGC TTCGTCGGCG GCTCGCCGCT GTGGGTGAAC CAGGCCGGCG TGAAGCCGAT CAGCGGCATC GCGACGCCGC CCGGCACGCC GCAGTGGGGC TCCGCGTGGA AGAAGGCGGT CAAGGACAAC TACGCGCACA CGATCTCGAT GGACGCGCAC GGCACCAACA TGTCGTACCG CGACGTGTAT CTCGACCTCG ATCCGACCTA TCGCGATTCG TACGGCCAGC CGCTGTTGCG GATGACCTTC GACTGGAAGG ACAACGACAT CAAGATGGCG CAGTACGTGA CCGGGCAGAT GAAGAAGATC GCGGAGGCGA TGGGGCCGAA GGCGATCGGC GTATCGACGC GCGAGTTCGG CAAGCACTTC GATTCGCGTG CGTACCAGAC GACTCACCTC GTCGGCGGCG CGATCATGGG CACCGACCCG AAGACGAGCG TGCTGAACCG CTACCTGCAG TGCTGGGACG TGCACAACGT GTTCGTGATG GGCGCGTCGG CGCTGCCGCA GGGCATCGGC TACAACCCGA CCGGGATCAT CGCGGCGCTG GCCTACTGGT CGGCACGTGC GATCCGCGAG CAATACCTGA AAAATCCCGC CCCGCTGGTG ACCGTATGA
|
Protein sequence | MAAEKKPHVD AVIVGFGWTG AILAKELTEA GLNVVALERG EYRDTYPDGA YPNTIDELTY NIRKKLFLDL SKTTVSIRHG LQDTALPYRQ LAAFLPGEGV GGAGLHWSGV HFRITPEELR LRSHYEERYG KKFIPEGMTI QDTGVTYEEL EPHFDFAEKV FGTSGQAYKV GGKVVGDGNV FEANRSDNFP LPAQLNTYSA QRFSDAAKSL GLHPYRLPSA NTSGPYTNPY GVQMGPCNFC GYCSGYACYM YSKASPNLNI LPALKQAPNF ELRSKCHVLR VDLDDTKKRA TGVTYVDPAG REVHQPADLV IVAAFQYHNV HLLLLSGIGK PYDPISGEGV VGRNFAYQNL STIKAFFDKD TYTNPFIGAG GNGVAVDDFN ADNFDHGPLG FVGGSPLWVN QAGVKPISGI ATPPGTPQWG SAWKKAVKDN YAHTISMDAH GTNMSYRDVY LDLDPTYRDS YGQPLLRMTF DWKDNDIKMA QYVTGQMKKI AEAMGPKAIG VSTREFGKHF DSRAYQTTHL VGGAIMGTDP KTSVLNRYLQ CWDVHNVFVM GASALPQGIG YNPTGIIAAL AYWSARAIRE QYLKNPAPLV TV
|
| |