Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B0779 |
Symbol | |
ID | 3752544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | - |
Start bp | 883231 |
End bp | 885570 |
Gene Length | 2340 bp |
Protein Length | 779 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637765628 |
Product | arginine decarboxylase |
Protein accession | YP_371537 |
Protein GI | 78061629 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0975108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0520497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCTT CCTTGACCCA ACCGGCCTTC CGCCGCCTCG GCATGAAGGC GCTGCTCGTG CAGCACGACA TCGATGAACG TACCGCCACC GGGCGCGCCG CGACAGCGCT TGCCGAGGAG CTGCGCACGC GGCTCGTCGA CGTCGTGATC GCGACATCCG CCGACGATGC CTGCGCGGTG GTCGCCGCCG ATCCGGCGAT CCAGTGCCTG CTGCTCAACT GGGAACTCGG CAACGATGCC GACCACGCAC CCGCGCAGGC CGTGCTCGAC GCGATGCGCG CACGCAATGC GACCGTGCCC GTGTTCCTGC TCGCGAGCCG CGCGAGCGCG TCCGCGATTC CGGTCGACGC GATGCGCAAG GCCGACGACT TCATCTGGAT GCTGGAGGAC ACCACCGCGT TCATCGGCGG CCGGATCGTC GCCGCGATCG AACGCTACCG CGAAACCGTG CTGCCGCCGA TGTTCCGCGC GCTCGCGAAG TTCTCGCGCG TGTACGAATA CTCGTGGCAC ACGCCCGGCC ACACGGGCGG CACCGCGTTC CTGAAATCGC CGGTCGGCCG TGCGTACTTC GAATTCTTCG GCGAATCGCT GTTCCGTTCG GACCTGTCGA TCTCGGTCGG CGAACTCGGC TCGCTGCTCG ATCACTCGGG CCCGATCGGC GAAAGCGAAC GCTATGCGGC GCGCGTGTTC GGCGCGCATC GCACGTATCA CGTGACGAAC GGCTCGTCGA TGTCGAACCG CGTGATCCTG ATGGCGAGCG TCACGCGCAA CCAGGTCGCG CTGTGCGACC GCAACTGCCA CAAGTCGGCC GAGCACGCGA TGACAATGTC CGGCGCGATT CCGACCTACC TGATTCCGTC GCGCAACCAC TACGGGATCA TCGGCCCGAT CATGCCCGAG CGGCTGACGG CCGCCGCCGT ACGCCTGGCA ATCGACGCGA ACCCGCTCGT GCGCGGTCGC GACGGCATCG ACCCGACACC CGTGCATGCG CTGATCACGA ACTCGACGTA CGACGGCCTC TGCTACAACG TCGCGCGCGT CGAGGAACTG CTCGGCCAGA GCGTCGATCG ATTGCATTTC GACGAGGCGT GGTACGGCTA CGCGCGCTTC AACCCGATCT ACCGCGACCG TCACGCGATG CACGGCGATC CGTCGCAACA CGACGCGAGC AAGCCGACCG TGTTCGCGAC GCAGTCGACG CACAAGCTGC TCGCCGCGCT GTCGCAGGCC TCGTTCATCC ATGTCCGCGA CGGCCGCAAC CCGATCGAGC ACGCGCGCTT CAACGAGGCG TACATGATGC ATGCGTCGAC GTCGCCGAAC TACGCGATCA TCGCGTCGAA CGACGTGAGC GCCGCGATGA TGGACGGCCC CGGCGGCGAG GCGCTGACGA CGGACGCGAT CCGCGAGGCC GTCGCGTTCC GCCAGATGCT GGCGCGCCTG CATACGGAAT GTGCGGAGAA CAACGACTGG TTCTTCAACG GCTGGCAGCC CGATAGCGTC GTCGATCGCA AGACGGGCCG CCGCGTGCGC TTCCACGAAG CGGACGAAAC GCTGCTCGCC ACCGACCCGT CGTGCTGGGT GCTGCATCCG GGCGACACGT GGCACGGCTT CGGCGATATC GAGGACGACT ACTGCATGCT CGACCCGATC AAGGTGTCGA TCGTCACGCC GGGTGTCGCC TCGCATGGCG GGCTGATGCC GGTCGGCATT CCGGCGTCGG TCGTCACCGC GTATCTCGAC CGGCACGGGA TCGTCGTCGA GAAGACGACC GACTTCACGA TCCTGTTCCT GTTCTCGCTC GGCGTGACGA AGGGCAAGTG GGGCACGCTC GTCAACACGC TGCTCGACTT CAAGCGCGAC TACGATGCGA ACGCGCCGCT GGAACAGGCG CTGCCCGAAC TCGTCGCGCG CTATCCGGAA CGCTACGGCA AGATCGGCCT GCGCGACCTG TGCGACCTGA TGTTCAGCTC AATGAGCGAC CTGAAGACGA CCGAGATGAT GTCGCGCGGC TTCTCGACGC TGCCGAAGCC CGACTACAGC CCGGCCGAGG CGTTCGAGCA TCTGGTGCAC AACGACATCG AGATGCTGGA GCTGTCGGAG ATGGAAGGCC GCACTGTCGC GACAGGCGTC GTGCCCTATC CGCCCGGCAT TCCGCTGCTG ATGCCCGGCG AGAACGCGGG GTCGGCCGAC GGCCCGCTGC TCGGCTACCT GAAGGCGCTC GAGCAGTACG ACCTGCGCTT CCCGGGCTTC ACGCACGACA CGCACGGTGT CGAAGTCGAG GATGGCGTGT ACCGGATCGC GTGCATCAAG CAGAAGGCAA GCGATAACAA CACGCGCTGA
|
Protein sequence | MTASLTQPAF RRLGMKALLV QHDIDERTAT GRAATALAEE LRTRLVDVVI ATSADDACAV VAADPAIQCL LLNWELGNDA DHAPAQAVLD AMRARNATVP VFLLASRASA SAIPVDAMRK ADDFIWMLED TTAFIGGRIV AAIERYRETV LPPMFRALAK FSRVYEYSWH TPGHTGGTAF LKSPVGRAYF EFFGESLFRS DLSISVGELG SLLDHSGPIG ESERYAARVF GAHRTYHVTN GSSMSNRVIL MASVTRNQVA LCDRNCHKSA EHAMTMSGAI PTYLIPSRNH YGIIGPIMPE RLTAAAVRLA IDANPLVRGR DGIDPTPVHA LITNSTYDGL CYNVARVEEL LGQSVDRLHF DEAWYGYARF NPIYRDRHAM HGDPSQHDAS KPTVFATQST HKLLAALSQA SFIHVRDGRN PIEHARFNEA YMMHASTSPN YAIIASNDVS AAMMDGPGGE ALTTDAIREA VAFRQMLARL HTECAENNDW FFNGWQPDSV VDRKTGRRVR FHEADETLLA TDPSCWVLHP GDTWHGFGDI EDDYCMLDPI KVSIVTPGVA SHGGLMPVGI PASVVTAYLD RHGIVVEKTT DFTILFLFSL GVTKGKWGTL VNTLLDFKRD YDANAPLEQA LPELVARYPE RYGKIGLRDL CDLMFSSMSD LKTTEMMSRG FSTLPKPDYS PAEAFEHLVH NDIEMLELSE MEGRTVATGV VPYPPGIPLL MPGENAGSAD GPLLGYLKAL EQYDLRFPGF THDTHGVEVE DGVYRIACIK QKASDNNTR
|
| |