Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B0561 |
Symbol | |
ID | 3752325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 625786 |
End bp | 627675 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637765409 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_371319 |
Protein GI | 78061411 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGTG AAGAAAAAGC GGCGAGTCTG CCGCGTGGCT TGACGGGCGG CTCGATGATG ATCGCCGCCG CAGCCGTGTC GCTGGCGTTG GGCGGATGCG TGCCGTCGGG CTTCCTGCCG TCGCTGTCGC TGCGTGCACC GGCCGACGAT GCGCTCGCGC ATACGGCCGG CCCCGGTGTG AACGGCGCCT GGCCCGCGCC CGACTGGGTC AAGCAGTTGA AGGATCCGCA ACTCGACGCA CTGGTTGCCG AGGCTTCGCA AAACAACCCC GACCTGCAGG TCGCGCAGGC GCGGCTGCGG ATCGCGCAGG CGCAGCTTCA GCAGTTCGAT TCGTTGACGG GGCTGACGGG TACGGCCGGC GCGACGGTCA GCCGCGCGCG GATGCCGAAG CCGGGCAACG ACGTCGCCGA CGTGTCGGTC AGCGGCTATC GCGTACCTGT CGAGATCTTT GGCGATCCGA ACACCTCGCC GTCGTCGGTG TTCGTCGGGC TGACTTACCA GCTCGACCTG TGGGGGAAGA ACCGCGCCGC GACGAAGAGC CTGATGTCGC TGCGCGAAGC GGCGCGGGTC GAGGCCGAGC AGGTGCGGCT CACGCTGGCG GTGGCGATCG TCACCGTGTA CTGCCAGCTC GACCAGGCGT ATGCGACGCA GGAACTGCTG CAGCAGAAAC TGAAGGTGAG CCAGCGCGTG ACGACCGTGC TGCGCGAGCG CACCGCGCGC GGGCTCGACA ACGCGTACGA CGCCAGCGAC GCATCGATCA AGCGCAGCAA GCTGCTCGCG CAGATCGCGC TCAACGACGA ACAGATCAAG CTCGCGCAAT TGCAGCTCGG CGTGCTGTCG GGCCGCGGCC CCGAGCGCGG GCTCGCGCTG CAGCGGCCGC GCGTCGGCGC GTTCGCGGGC GGCGCGCTGC CCGCGCGGCT GCCGGCCGAT CTCCTGGGCC GCCGGCCGGA CATCGTCGCC GCGCGTTTGC GCGTCGAGGC CGCGTTCGCG AATGCCGATT CGACGCGCGC ACAGTTCTAT CCGGACGTGA ACCTCGTCGC GCTCGGCGGC GTGTTCGCGC TGACGCCCGC GTCGCTGTTC TCGCGCGATG CGCTCGCCGG CTCTGTCGGC CCGGCGATCT CGCTGCCGAT CTTCGATCGC GGCCGGCTGA AGGCGAAGCT CGGTGCGGAT GTCGCGCAGG CCGACGTCGC GATCGGGATG TACAACAAGA CCGTCGACGA CGCGCTCGGG CAGGTCGCGC AGTTCGTCAC GTCGCTGCAG ACGTCGCAGA CGCTCGTCGC GCAGCAGCAG GACGCGGTTG CGGCCGCGCA GAAGATCGTG GAGATCGCGA CCGACCGTCA CCGGCGCGGC GTGCTGATGC AGAAGGATGT GGACGTCGCG GATCTCACGC TGATCGACGA ACGCGCGCAG ATGATCGCGT TGCTCGGCCG GCAGCGGACG CTGCGTGTCG GGCTGATCGG CGCGCTGGGC GGCGGGTTCG ATGCGGGCGC AACGGTTGCG CAGGCGCCGG CCGCGCATCG GGCGCGTAGC GGGGCGGCGA AGCGGGGTGC TTCGGCTGCT TCGCCCGCAG TGGTTGCTGC GACCATGCCG ACTGCCGCCG TGGCCGCCAG CCGACCGGTG GCGGTGGCGT CGGCCGACGT GCATGCGGCG AGCGCGGCCG TGCCGCCGAT CGTCGCTGCA TCGAATGCGG GGTCCGCATC CGCATCCGCA TCCGCATCCG CGACCGCACG ACGCGACGAC GCGGCTCGCG CGCCGGCCGT CGGCACGACG CCTCGCGGCA CCTCCATTCT TGCGCACACG GCCGCGGCGA TTCCGGCGCC GAGCCCGTCG GTCATGCCGC CGATCCCCTT GTTCCAGCAC GATCGTCTGA TCGTTACGCA AAGCGACTGA
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Protein sequence | MRREEKAASL PRGLTGGSMM IAAAAVSLAL GGCVPSGFLP SLSLRAPADD ALAHTAGPGV NGAWPAPDWV KQLKDPQLDA LVAEASQNNP DLQVAQARLR IAQAQLQQFD SLTGLTGTAG ATVSRARMPK PGNDVADVSV SGYRVPVEIF GDPNTSPSSV FVGLTYQLDL WGKNRAATKS LMSLREAARV EAEQVRLTLA VAIVTVYCQL DQAYATQELL QQKLKVSQRV TTVLRERTAR GLDNAYDASD ASIKRSKLLA QIALNDEQIK LAQLQLGVLS GRGPERGLAL QRPRVGAFAG GALPARLPAD LLGRRPDIVA ARLRVEAAFA NADSTRAQFY PDVNLVALGG VFALTPASLF SRDALAGSVG PAISLPIFDR GRLKAKLGAD VAQADVAIGM YNKTVDDALG QVAQFVTSLQ TSQTLVAQQQ DAVAAAQKIV EIATDRHRRG VLMQKDVDVA DLTLIDERAQ MIALLGRQRT LRVGLIGALG GGFDAGATVA QAPAAHRARS GAAKRGASAA SPAVVAATMP TAAVAASRPV AVASADVHAA SAAVPPIVAA SNAGSASASA SASATARRDD AARAPAVGTT PRGTSILAHT AAAIPAPSPS VMPPIPLFQH DRLIVTQSD
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