Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B0141 |
Symbol | prpB |
ID | 3751956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 153811 |
End bp | 154704 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637764987 |
Product | 2-methylisocitrate lyase |
Protein accession | YP_370902 |
Protein GI | 78060994 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.758126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.590891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATA CGCATCTTCA GAGCGCCGGC GCGAAATTCC GCGCGGCAGT CGCGGCGGAG CAGCCGCTGC AGGTAGTCGG CGCGATCACC GCCTACGCAG CCAAGATGGC GCAGGCCGTC GGCTTCAAGG CCGTGTACCT GTCGGGTGGC GGCGTCGCCG CGAACTCGCT CGGGATCCCC GACCTCGGCA TCAGCACGAT GGAAGACGTG CTGATCGACG CGAACCGCAT CACCAACGCG ACCGACCTGC CGCTGCTGGT CGATATCGAT ACGGGCTGGG GCGGCGCGTT CAACATCGCG CGCACGGTGC GCTCGTTCAT CAAGGCCGGC GTCGCGGCCG TGCACCTGGA AGACCAGGTC GGCCAGAAGC GCTGCGGCCA CCGTCCGGGC AAGGAAGTCG TGCCGGTCGA AGAAATGGTC GATCGCGTCA AGGCGGCGGT CGATGCGCGT ACCGACGACC AGTTCGTGAT CATGGCGCGC ACCGACGCCG CCGCGGCCGA AGGGATCGAT TCGGCGATCG AGCGCGCGGT GGCCTATGTC GAAGCCGGCG CGGACATGAT CTTCCCGGAA GCGATGAAGT CGCTCGACGA CTACCGTCGT TTCAAGGCAG CCGTGAAGGT GCCGATCCTC GCGAACCTGA CCGAATTCGG CTCGACGCCG CTGTTCACGC TCGACGAGCT GCGCGAGGCG AACGTCGACA TCGCGCTGTA CTGCTGCGGC GCGTATCGCG CGATGAACAA GGCCGCACTG AACTTCTACG AGACGCTGCG CCGCGACGGC ACGCAGAAGG CGGCCGTGCC GACAATGCAG ACGCGCGCCG AGCTGTACGA CTTCCTCGGC TATCACGAAT ACGAGCGCAA GCTCGACGAG CTGTTCGCGC AGGGCAAGAA GTAA
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Protein sequence | MSNTHLQSAG AKFRAAVAAE QPLQVVGAIT AYAAKMAQAV GFKAVYLSGG GVAANSLGIP DLGISTMEDV LIDANRITNA TDLPLLVDID TGWGGAFNIA RTVRSFIKAG VAAVHLEDQV GQKRCGHRPG KEVVPVEEMV DRVKAAVDAR TDDQFVIMAR TDAAAAEGID SAIERAVAYV EAGADMIFPE AMKSLDDYRR FKAAVKVPIL ANLTEFGSTP LFTLDELREA NVDIALYCCG AYRAMNKAAL NFYETLRRDG TQKAAVPTMQ TRAELYDFLG YHEYERKLDE LFAQGKK
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