| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0106 |
|---|
| Symbol | ispH |
|---|
| ID | 3752001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 112519 |
|---|
| End bp | 113460 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637764952 |
|---|
| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
|---|
| Protein accession | YP_370867 |
|---|
| Protein GI | 78060959 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTCA TCCTTGCCCA GCCCCGCGGC TTTTGTGCGG GGGTTGTCCG TGCGATCGAG
ATCGTCGATC GCGCGCTGCA ACAGCACGGT GCGCCGGTCT ATGTGCGTCA TGAGATCGTG
CATAACCGGC ATGTCGTCGA AAATCTGCGT AATAAAGGGG CGCGATTCGT TGAGGAACTC
GACGAGGTGC CCCACGGCGC TGTCGCGATC TTCAGCGCGC ACGGTGTCGC CCAAACGGTC
GAGCGCGACG CGGAAACGCG CGGGCTCGAC GTGCTCGACG CCACCTGCCC GCTTGTCACG
AAAGTGCACG TGCAGGGCCG CCAGTATGTC GCGGCGGGCC GCCGGCTGAT CCTGATCGGC
CACGCGGGCC ACCCGGAAGT CGAGGGTACG ATCGGCCAGA TTCCGGCCGA GGTGATCCTC
GTGCAGAGCG AAGCAGAAGT CGATACGCTG ACGGTGCCTG TCGATACGCC GGTCGCGTAC
ATTACGCAGA CCACGCTGTC GGTCGACGAT ACGCGCGGCA TCATCGAAGC GTTGCAGCGC
CGGTTCACCG ACCTCGTCGG CCCGGACACG CGCGACATCT GCTACGCGAC GCAAAATCGC
CAGGCCGCCG TGCGCGAGCT GAGCGAACAG GTTGACGTGC TGCTCGTCGT CGGTGCGACG
AACAGCTCGA ACTCGAACCG CCTGCGCGAG ATCGGCACCG AAAGTGGTGT GCCGAGCTAC
CTCGTCGCCG ACGGTTCAGA AGTAAAGGCC GAATGGTTCG CGAATGCGAA GACCGTGGGC
CTGACCGCCG GGGCGTCCGC GCCCGAGGAA ATGGTCGAAG ATGTAATCGG CGCGTTGCGC
GCACTGGGTC CCGTCGACGT CACGACGATG GCGGGCCGTG AGGAAAAAGT CGAATTCAAG
CTGCCGGCGA AGCTCACGCA AGCTGTCGCC CGCGAAGTTT AA
|
|---|
| Protein sequence | MRVILAQPRG FCAGVVRAIE IVDRALQQHG APVYVRHEIV HNRHVVENLR NKGARFVEEL
DEVPHGAVAI FSAHGVAQTV ERDAETRGLD VLDATCPLVT KVHVQGRQYV AAGRRLILIG
HAGHPEVEGT IGQIPAEVIL VQSEAEVDTL TVPVDTPVAY ITQTTLSVDD TRGIIEALQR
RFTDLVGPDT RDICYATQNR QAAVRELSEQ VDVLLVVGAT NSSNSNRLRE IGTESGVPSY
LVADGSEVKA EWFANAKTVG LTAGASAPEE MVEDVIGALR ALGPVDVTTM AGREEKVEFK
LPAKLTQAVA REV
|
|---|
| |