Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B0017 |
Symbol | |
ID | 3751774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 17086 |
End bp | 17934 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637764863 |
Product | squalene/phytoene synthase |
Protein accession | YP_370778 |
Protein GI | 78060870 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCGTTT CCAATTCCGT CGTGGACGAA CAAGAAACCG ACGCCGCTGC CGTCACATCG AGCAGTTCCT TCTATCTTGC GATGCGCATC CTGCCGGCCG TGCAGCGCGA TGCGATGTTC CAGGTCTACG CGTTTTGCCG CGCGGTCGAC GACATCGCCG ACAGCGACCT GCCGCGCGCC GAGCGCAACG CGGGCCTCGA TCGCTGGCGC GCGGACATCG ACGCGTGCTT CGCCGGCCGC CCGCCGCGCC ACCTGGCTGC GCTCGACCGC GAGATCCGCG CATTCAACCT GCAGCGCGAC GACTTCCACG CGATGATCGA CGGGATGGCG ATGGATGCGG TCGAAGACAT CTGCGCGCCG GACGAGCCGA CGCTCGACCT CTTCTGCGAT CGCGTGGCGA GCGCGGCCGG CCGGCTGTCG GTGAGGATTT TCGGGATGCC GGAAGCCGAA GGGATCAAGC TGTCGCATCA CCTCGGCCGC GCGCTGCAAC TGACGAACAT CCTGCGCGAC ATCGACGACG ATGCGGCGAT CAACCGTTGC TACCTGCCGC GCGAACTGCT TGCGCGCGAA GGCATCGCGA TCACCGACCC GGCGACGATC GTGCGCGATC CGGCGCTGCC GCGCGTGTGC GCGACGCTCG TCGAGCGCGC GCTCGAGCAC TTCCGCCAGG CCGACGCGGT GATGGATAGC TGCGCGCGTG CGCAGGTGAA GGCGCCGCGC ATCATGTCGG GCGCGTATCG CTGCATTCTC GAAGCCGCGA TCGCACGCGG CTTTGCGTTC CCGCGCGCGC CGCTGCGCAA GCCGAAAGCG CGCATGCTGA TGATCGCCGC GCGCTACGCG CTGTTCTGA
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Protein sequence | MAVSNSVVDE QETDAAAVTS SSSFYLAMRI LPAVQRDAMF QVYAFCRAVD DIADSDLPRA ERNAGLDRWR ADIDACFAGR PPRHLAALDR EIRAFNLQRD DFHAMIDGMA MDAVEDICAP DEPTLDLFCD RVASAAGRLS VRIFGMPEAE GIKLSHHLGR ALQLTNILRD IDDDAAINRC YLPRELLARE GIAITDPATI VRDPALPRVC ATLVERALEH FRQADAVMDS CARAQVKAPR IMSGAYRCIL EAAIARGFAF PRAPLRKPKA RMLMIAARYA LF
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