Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A6435 |
Symbol | dapF |
ID | 3751668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | + |
Start bp | 3601309 |
End bp | 3602178 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637764756 |
Product | diaminopimelate epimerase |
Protein accession | YP_370673 |
Protein GI | 161702953 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.497527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACTCT CGTTCACCAA GATGCACGGC GCGGGCAACG ACTTCGTCGT GCTCGACGGC TATTCGCGCG CGTTGCCGCC GCTCACCGAA GCGCAGGTGC GTGCGCTCGC CAATCGTCAC TTCGGCATCG GCGCCGACCA GCTGCTGCTC GTCGAAAAAC CGACCGTCGA CGGCGTGGAT TTCAAGTACC GGATCTTCAA TTGCGACGGC GGCGAGGTCG AACACTGCGG CAACGGCGCA CGCTGCTTCG TGAAATTCGT CAGCGACCGC GGCCTGACCG ACAAGCGCAG CGTGCGCGTG CAGGTGATGA AGGGCCTGAT CACGCTGACG ATGCAGGACA ACGGCGAAGT CGTCGTCGAC ATGGGTGCGC CCGTGTTCAC GCCGGCGCAG GTGCCGTTCG ACGCAGCGGG CCTCGACGGC CGCACCGAGG GCCACGACAC GCTGTGGCCG CTCGACGTCG GCGGCGCGAC GCGCTGGATC TCGACGGTGA CGATGGGCAA CCCGCACGCG GTGCAGGTCG TCGACGACGC CGAGGCCTAT CCGGTGCTCG AAGAAGGCCC GCTGATCGAG CACCATGCGC GCTTTCCGGA GCGCGTGAAC GCCGGCTTCA TGCAGGTCGT GTCGCGCAGC GAAGTGAAGC TGCGCGTGTA CGAACGCGCG GCGGGCGAGA CGCTCGCGTG CGGCACCGGC GCGTGCGCGG CGGTCGCGGC CGGCATCCGG CGCGGCCTGC TCGATTCGCC CGTGACCGTG CACACGCACG GCGGCACGCT GACGATCAGC TGGGACGGCG CGCGCGACGA AGCCGCCGCG CTGATGATGG CCGGGCCCGC CACGACCGTG TTCGAAGGCG AGATCGACCT GCCCGCCTGA
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Protein sequence | MKLSFTKMHG AGNDFVVLDG YSRALPPLTE AQVRALANRH FGIGADQLLL VEKPTVDGVD FKYRIFNCDG GEVEHCGNGA RCFVKFVSDR GLTDKRSVRV QVMKGLITLT MQDNGEVVVD MGAPVFTPAQ VPFDAAGLDG RTEGHDTLWP LDVGGATRWI STVTMGNPHA VQVVDDAEAY PVLEEGPLIE HHARFPERVN AGFMQVVSRS EVKLRVYERA AGETLACGTG ACAAVAAGIR RGLLDSPVTV HTHGGTLTIS WDGARDEAAA LMMAGPATTV FEGEIDLPA
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