Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A6413 |
Symbol | fliF |
ID | 3751646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | + |
Start bp | 3580475 |
End bp | 3582238 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637764734 |
Product | flagellar MS-ring protein |
Protein accession | YP_370651 |
Protein GI | 78067882 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.340617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCGC AGGCCAACTC GCTGATCAAC CCAGACGCCC GCGCGGGCCT CGCCAGCCCG GCGCCCGGCG CCGCCGCGGC CGCCGCGTTG CCGGGCGCGG GTGGCGCAGG CGCGGACTTC GGGCTTGGCG GCTTCGCGGA ACGCATCCCC GGCATCTCGC GGATGAAGGG CAACCCGAAG CTGCCGTTCC TGATCGCCGT CGCATTCGCG GTCGCCGTCA TCACCGCGCT CGTGCTGTGG AGCCGTGCGC CCGACTACCG CGTGCTGTAC AGCAACCTGT CGGATCGCGA CGGCGGCGCA ATCATTGCCG CGCTCCAGCA GGCAAACGTT CCCTACAAGT TCGCCGATGC CGGCGGCGCG ATCCTCGTGC CGTCGAACCA GGTGCATGAA ACGCGCCTGA AGCTCGCCGC GATGGGGCTG CCGAAAGGCG GCTCGGTCGG CTTCGAGCTG ATGGACAACC AGAAATTCGG CATCAGCCAG TTCGCCGAGC AGATCAACTA CCAGCGCGCG CTCGAAGGCG AGCTGCAGCG CACCATCGAA TCGATCAACG CCGTGCGCGG CGCGCGCGTG CATCTCGCGA TCCCGAAACC GTCGGTGTTC GTGCGCGACA AGGAAGCGCC GAGCGCGTCG GTGTTCGTCG ACCTCTACCC GGGCCGCGTG CTCGACGAGG GCCAGGTTCA GGCAATCACG CGGATGGTGT CGTCCGGCGT GCCCGACATG CCCGCGAAGA ACGTGACGAT CGTCGACCAG GACGGCAACC TGCTGACCCA GACCGCGTCG GCATCCGGCC TCGACGCGAG CCAGCTCAAG TATGTACAGC AGGTCGAGCA CAACACGCAG AAGCGCATCG ACGCGATCCT CGCGCCGATC TTCGGCACGG GCAACGCGCG CTCGCAGGTC AGCGCGGACC TCGATTTCTC GAAGATCGAG CAGACGTCGG AAAGCTACGG CCCGAACGGC AATCCGCAGC AATCCGCGAT CCGCAGCCAG CAGACCAGCA GCGCGACCGA ACTCGCGCAG GGCGGCGCGT CGGGCGTGCC GGGCGCGCTG TCGAACACGC CGCCGCAACC GGCTTCCGCG CCGATCGTCG CCGGCAACGG CCAGAACGCG CCGCAGACAA CCCCGGTGAG CGACCGCAAG GACCAGACGA CCAACTACGA AGTCGACAAG ACGATCCGCC ATCTCGAGCA GCCGATGGGC AGCGTGAAGC GGCTGTCGGT CGCGGTCGTC GTCAACTACC AGCCGGTCGC CGACGCGAAG GGCCACGTGA CGATGCAGCC GCTGCCGCCC GCGAAGCTCG CGCAGGTCGA ACAGCTCGTG AAGGATGCGA TGGGCTACGA CGAGAAGCGC GGCGACTCGG TGAACGTCGT GAACAGCGCG TTCTCGACCG TGAGCGACCC GTACGCCGAC CTGCCGTGGT GGCGCCAGCC GGACATGATC GCGATGGCGA AGGAAGCGGC GAAGTGGCTC GGCATCGCTG CGGCCGCCGC GGCGCTCTAC TTCATGTTCG TGCGCCCGGC GATGCGCCGT GCGTTCCCGC CGCCCGAGCC GGTCGCACCG GCGCTCGCGG CACCGGAAGA TTCCGTCGCG CTCGACGGCC TGCCGGGACC GGAGAAGTCC GAGGAGCCCG ACGCGCTGCT GCTCGGGTTC GAAAGCGAAA AGAACCGTTA CGAACGCAAC CTCGACTACG CGCGCACGAT CGCCCGCCAG GATCCGAAGA TCGTCGCCAC CGTCGTGAAG AACTGGGTGT CCGATGAACG CTGA
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Protein sequence | MDSQANSLIN PDARAGLASP APGAAAAAAL PGAGGAGADF GLGGFAERIP GISRMKGNPK LPFLIAVAFA VAVITALVLW SRAPDYRVLY SNLSDRDGGA IIAALQQANV PYKFADAGGA ILVPSNQVHE TRLKLAAMGL PKGGSVGFEL MDNQKFGISQ FAEQINYQRA LEGELQRTIE SINAVRGARV HLAIPKPSVF VRDKEAPSAS VFVDLYPGRV LDEGQVQAIT RMVSSGVPDM PAKNVTIVDQ DGNLLTQTAS ASGLDASQLK YVQQVEHNTQ KRIDAILAPI FGTGNARSQV SADLDFSKIE QTSESYGPNG NPQQSAIRSQ QTSSATELAQ GGASGVPGAL SNTPPQPASA PIVAGNGQNA PQTTPVSDRK DQTTNYEVDK TIRHLEQPMG SVKRLSVAVV VNYQPVADAK GHVTMQPLPP AKLAQVEQLV KDAMGYDEKR GDSVNVVNSA FSTVSDPYAD LPWWRQPDMI AMAKEAAKWL GIAAAAAALY FMFVRPAMRR AFPPPEPVAP ALAAPEDSVA LDGLPGPEKS EEPDALLLGF ESEKNRYERN LDYARTIARQ DPKIVATVVK NWVSDER
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