| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A6388 |
|---|
| Symbol | dppF |
|---|
| ID | 3751621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 3555719 |
|---|
| End bp | 3556735 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637764709 |
|---|
| Product | dipeptide transporter ATP-binding subunit |
|---|
| Protein accession | YP_370626 |
|---|
| Protein GI | 78067857 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAG TCAATCAAAC GCCTCGCGTG TCGAACGACG AGGAAGCCGT GCTGGTGGCC
GACGGCCTCG CGAAACACTA CTCGGTGAAG CGCGGGATGT TCGGTCAGGG CACGGTGAAG
GCGCTGAACG GCGTGTCGTT CTCGCTGAAG CGCGGCAAGA CGCTCGCCGT CGTCGGCGAA
TCGGGCTGCG GGAAGTCGAC GCTCGCGCGC CAGCTCACGA TGATCGAGAC GCCCACCTCG
GGCAGCCTGA CGATCGACGG CAAGAACGTG GCCGGCGCCA GCCGCGAGAC GGTTGCCGAC
CTGCGCCGCC GCGTGCAGAT GGTGTTCCAG AACCCGTTCG CGTCGCTCAA CCCGCGCAAG
ACCGTCGAGC AGACGCTGTC CGAACCGCTC GAGATCAACG CGAACCTGAC GGCCGCCGAA
CGCGCGCAGC GCATCGCGCA GATCATGCGC ACGGTCGGCC TGCGGCCCGA GCACGCGAAG
CGCTATCCGC ACATGTTCTC GGGCGGCCAG CGCCAGCGTG TCGCGATCGC GCGCGCGATG
ATCCTCGATC CGCGCATCGT CGTCGCCGAC GAGCCGGTGT CCGCGCTCGA CGTGTCGATC
CAGGCGCAGA TCCTGAACCT GTTCATGGAT CTGCAGGAGC AGTTCAAGAC GAGCTACGTG
TTCATCTCGC ACAACCTGTC GGTGGTCGAG CACGTCGCCG ACGACGTGAT GGTGATGTAC
TTCGGCAGCG TCGCCGAGCT CGGCGACAAG GCAACGATCT ACGCACGGCC GCGCCATCCG
TACACGCGCG CGCTGATGTC GGCGACGCCG GCGATCTTCG AGGAAGACCG CCGCGTGCAG
ATCAAGCTGC AGGGCGAACT GCCGTCGCCG CTCAATCCGC CGTCGGGCTG CGCGTTCCAC
CAGCGTTGCC CGTATGCGGT CGAGCGCTGC CGGGCGGAGG AGCCGCAGCT GCGCGAGGTC
GACGGCCGGC GCGTGGCCTG CCATCGGGCC GAGGAGGTAG GGGAGGCGAA TGCCTGA
|
|---|
| Protein sequence | MNAVNQTPRV SNDEEAVLVA DGLAKHYSVK RGMFGQGTVK ALNGVSFSLK RGKTLAVVGE
SGCGKSTLAR QLTMIETPTS GSLTIDGKNV AGASRETVAD LRRRVQMVFQ NPFASLNPRK
TVEQTLSEPL EINANLTAAE RAQRIAQIMR TVGLRPEHAK RYPHMFSGGQ RQRVAIARAM
ILDPRIVVAD EPVSALDVSI QAQILNLFMD LQEQFKTSYV FISHNLSVVE HVADDVMVMY
FGSVAELGDK ATIYARPRHP YTRALMSATP AIFEEDRRVQ IKLQGELPSP LNPPSGCAFH
QRCPYAVERC RAEEPQLREV DGRRVACHRA EEVGEANA
|
|---|
| |