Gene Bcep18194_A6027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A6027 
Symbol 
ID3751259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp3162578 
End bp3164293 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content73% 
IMG OID637764347 
ProductTPR repeat-containing protein 
Protein accessionYP_370265 
Protein GI78067496 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0697264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAT TGCGGTGCGC GCGACGCGTG CCGCGCCCAC CGCTAGCCGA TTCCGACTGC 
ATGGACGATC CGACCGATAT CCTCATTCCG CTGCTTCCGC CGTTCCTCGC GCTGCTCGGG
CAGGCCGCCG ATGCGCAGGC GCGCGGCGAG CACGCCGCGC ACGATCTGTG GCTCGCCGCC
GCCGCGCACC TGCATGCGGT CGACGCCGAT GCGCTCGCGC AACTCACCGG CACGCTCGTT
TCGCGGCAGC GTGCGGCCGA TGCGATCGCG CTCGCCGAAT GCACGGCGCG CGTGCAGCCG
GGCGCGACCG CGTACTTCAA TCACGGTTAC GCGCTGCAGA TGGCGGGCCG GCACGCGGAC
GCCGTGGCGC CGTATCGCGC GGCGCTGGCG CTCGATGCCG ACCGGCCGTC GCTGCGCAAC
AACCTCGCGA TTGCGCTGCG GCTGTCGGGC AGCGACCGCG CGGAGGAGAT CGCGCTGCTC
GAAGCGGCGG TGCGCGTCGA TCCACGCGAC GTGCAGGCGT GGATCAACCT CGTCGTCGCG
CGGATCGCGA CGCACGACCT GGACGCCGCG CTCGCGTGCG CCGCTCGGCT CATCGAGCTC
GCGCCCGACA ACGCGCTCGC GATGAACAAC GTCGCGCTGG CGATGAAGGA GGCGCAGCGC
TGGGGCGACG CCGAGCACTA CGCGGTGCGC GCATGCGAGC TGGCGCCTGG CGACGCGTCG
TTCCGTTTCA ACCTGGCGAT CATCCAGCTC GTGCGCGGCA ACTCCGCCGC CGGCTGGCGC
GGCCACGAGG CGCGCTGGGA CGGCGCGGGC GAGTTGCGCG GCCGCCGGCC GGTGCTGCCA
GGCCCGCGCT GGCAGGGCGA GCCGCTCGCC GGCAAGACGC TGCTCGTGTG GGGCGAGCAG
GGGCTCGGCG ACGTGCTGCA GTTCTGCCGC TTCGTCGCAC CGCTCGCCGA GCGCGTGCAT
CGCGAGGGCG GCCGGCTCAT CTGGAATACG TTCCCGCTGG TGGGCACGCT GATGCAGCGC
AGCCTCGGCG CGCATGCGGA TGCGTTCAGC GCGGGCGGCG GCGTCGACCA GCTGCCGGCC
TTCGATTACG AAGTACCGCT GATCGGCCTG CCGCTGATGC TCGGCATGGA GGCGTCGACG
CTCGCGTCGT CAGTGCCGTA CCTGCGGGCC GATCCGTCCG CGCGCGACGC GTGGCGCGCG
CGGCTCGCGG GCGACCGCCG GCTGAAGGTC GGGCTCGTGT GGACCGGCAG CGCGGGGCAC
CAGCGCAATC CGTTCCGGCG TGTCGGGCTC GAGCGCTATG CCGACGCATT CCGCGGGATC
GACGGCGTCG CGTTTTATTC GCTGCAGCCG GGCGCGGACG CGGATGTCGC GGCGGCGCGC
GCGGCGGGCT TCGCGATCGA GGATGTCACG GCGGAGCTGA CGAGCTTCGA CGACACGGCC
GCGTTCATCG GCGCGCTGGA TCTGGTGATC ACCGTCTGCA CGTCGGTCGC GCACCTGGCG
GGCGCGCTGG GCGCGCGCAC CTGGGTGCTG CTCGACGTGA ATCCGCACTG GCCGTGGCTG
CTCGAACGCA ACGACAGCCC GTGGTATCCG ACCGCGACGC TGTACCGGCA ACCGGTGTTC
GGCGCGTGGG CGCCGGTGAT GGAGGACGTG AGCCGCGACC TGCGGCGCCT GGCCGCGCAG
CCGGCTCAAT CGACGGAGTC GGCCCGGCAG GCCTGA
 
Protein sequence
MRVLRCARRV PRPPLADSDC MDDPTDILIP LLPPFLALLG QAADAQARGE HAAHDLWLAA 
AAHLHAVDAD ALAQLTGTLV SRQRAADAIA LAECTARVQP GATAYFNHGY ALQMAGRHAD
AVAPYRAALA LDADRPSLRN NLAIALRLSG SDRAEEIALL EAAVRVDPRD VQAWINLVVA
RIATHDLDAA LACAARLIEL APDNALAMNN VALAMKEAQR WGDAEHYAVR ACELAPGDAS
FRFNLAIIQL VRGNSAAGWR GHEARWDGAG ELRGRRPVLP GPRWQGEPLA GKTLLVWGEQ
GLGDVLQFCR FVAPLAERVH REGGRLIWNT FPLVGTLMQR SLGAHADAFS AGGGVDQLPA
FDYEVPLIGL PLMLGMEAST LASSVPYLRA DPSARDAWRA RLAGDRRLKV GLVWTGSAGH
QRNPFRRVGL ERYADAFRGI DGVAFYSLQP GADADVAAAR AAGFAIEDVT AELTSFDDTA
AFIGALDLVI TVCTSVAHLA GALGARTWVL LDVNPHWPWL LERNDSPWYP TATLYRQPVF
GAWAPVMEDV SRDLRRLAAQ PAQSTESARQ A