| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5968 |
|---|
| Symbol | |
|---|
| ID | 3751199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 3096850 |
|---|
| End bp | 3098616 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637764287 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_370206 |
|---|
| Protein GI | 78067437 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.155936 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAA TATTCAGACC AAACGCCGCG ATGCGCGCCC GGCGCGCGGG ACGGCGTCGT
TTTCATCCTG CCATGCGTGT CAAACAGTTG CTTGCCGTGT CGCTGTCGGT GGCGCTCGCA
TTGCCGCCGA GCGGCCATGC GCAGAGTGCG TCCGCGCCGC CGCTCGAATC GGCGGCCGGC
GGCGCCCGGT CGATTTCCAC GGTGCCGTCC GGCATCGCGG CCGGCGTGTT CGGCACGTAC
GGCGGGGCGG AGAGCCGGTT TTCGGACACC GGCGGCGCGT CGGCGCCGGC CGCGAGCCTG
CGGGCGCCGC TTCGCTCGCT CGAGCTGCCC GACCTGGGCG ACGGTTCCGG CGGTTCGCTG
ACGCCTCAGG CCGAGCGCCG GCTCGGCGAG CGCGTAATGC GCGAAGTGCG GCGCGATCCC
GACTATCTCG ACGACTGGCT CGTGCGCGAC TACCTGAATG CGATGGCGGC GCGGCTCGCG
GCCGCGGCGG CCGCGCGCTT CATCGGCGGC TACACGCCGG ACTTCGACCT GTTCCCGGTT
CGCGATCCGC AGATCAACGC ATTCTCGATG CCGGGCGGCT TCATCGGGAT CAACAGTGGC
CTCGTCGTCA CGACACAGAC GGAGTCGGAA CTCGCATCGG TGGTCGGCCA CGAGATGGGG
CACGTGCTGC AGCGGCACAT CGCGCGGATG ATCGGTGCGA ACGAGAAAAC CGGCTATACG
GCGCTCGCGA CGATGCTGCT CGGCGTGCTG GCCGGCGTGC TCGCGAGAAG CGGCGACCTC
GGGAGTGCGA TCGCGGTGGG CGGGCAGGCA TATGCGGTGG ACAACCAGCT GCGCTTTTCG
CGATCGGCCG AGCGCGAGGC CGATCGTGTC GGTTTCCAGT TGCTCGCGGG CGCGGGCTAT
GACCCGTACG GGATGCCGGG CTTCTTCGAG CGGCTCGACC GCGCGTCGAT GGGCGATGCG
GGCGTGCCGG CGTACGCGCG CACGCACCCG CTGACCGGCG AGCGGATCGC CGACATGGAG
GATCGCGCGC GCCGCGCGCC GTACCGGCAG CCGCGCCAGT CGCCCGAGTA CGGTTTCGTG
CGCGCGCGGC TGCGCGTCCT GCAGAACCGC GCGCCGACCG ACATCGCGGC CGAGGCGCGG
CGAATGCAGT TCGAGATCGA CGATCGCACC GCGCCGAACG TCGCGGCGAA CTGGTACGGC
ATTGCGCTCG CGGATGCGCT GCTCGGCGAG TATGACGCCG CCGGCAAGGC ACTTGCGTCG
GCGCGCAGCG CGTTCGACGC GCGCGAGCGG CGCGAGGACG ATCCGGCGAC GAGTTCGCCG
AGCCTCGACG TGCTGGCCGC CGACATCGCG CGCCGCGCGG GTCGGGCCGA CGACGCGGTG
CGACTTGCGG CGCTCGCGCA GCGCCGCTGG CCGGCATCGC ACGCCGCGAT CGTCACGCAT
CTTCAGGCGC TGATCGCGGC GCGCCGTTTC GGTGAAGCGC AGGCGCAGGC CCGCGCGCAG
GCGAAGGCCG ACCCCGAACA GCCGGACTGG TGGGACTATC TCGCGAAGGC GAGCGACGGC
AAGGGCGACC TGCTGGCGCG GCGCCGCGCG CTCGCGGAGA AGCTTGCGCT CGACGGCGCG
TGGCCGTCGG CGATTCGCCA ACTGAAGGAA GCGCGCGATG CGAAAGACGT GTCGTTCTAC
GAGCAGTCGA TGATCGGTGC TCGGCTGCTG GAATTCGAAG CGCGCTACAA GGAAGAGCGC
GAAGACGAGA AGAACGGCCG CGGGTAG
|
|---|
| Protein sequence | MTRIFRPNAA MRARRAGRRR FHPAMRVKQL LAVSLSVALA LPPSGHAQSA SAPPLESAAG
GARSISTVPS GIAAGVFGTY GGAESRFSDT GGASAPAASL RAPLRSLELP DLGDGSGGSL
TPQAERRLGE RVMREVRRDP DYLDDWLVRD YLNAMAARLA AAAAARFIGG YTPDFDLFPV
RDPQINAFSM PGGFIGINSG LVVTTQTESE LASVVGHEMG HVLQRHIARM IGANEKTGYT
ALATMLLGVL AGVLARSGDL GSAIAVGGQA YAVDNQLRFS RSAEREADRV GFQLLAGAGY
DPYGMPGFFE RLDRASMGDA GVPAYARTHP LTGERIADME DRARRAPYRQ PRQSPEYGFV
RARLRVLQNR APTDIAAEAR RMQFEIDDRT APNVAANWYG IALADALLGE YDAAGKALAS
ARSAFDARER REDDPATSSP SLDVLAADIA RRAGRADDAV RLAALAQRRW PASHAAIVTH
LQALIAARRF GEAQAQARAQ AKADPEQPDW WDYLAKASDG KGDLLARRRA LAEKLALDGA
WPSAIRQLKE ARDAKDVSFY EQSMIGARLL EFEARYKEER EDEKNGRG
|
|---|
| |