Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A5939 |
Symbol | |
ID | 3751170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 3065150 |
End bp | 3068350 |
Gene Length | 3201 bp |
Protein Length | 1066 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637764258 |
Product | hydrophobe/amphiphile efflux-1 pump, HAE1 |
Protein accession | YP_370177 |
Protein GI | 78067408 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.794955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.377291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGT TTTTTATCGA TCGCCCGATC TTCGCGTGGG TGATCGCCAT CATTCTGATG CTGGCCGGGG TCGCGTCGAT CTTCACGCTT CCGATCTCGC AGTATCCGAC GATCGCGCCG CCATCGATCC AGATCACCGC GAACTACCCG GGTGCTTCCG CGAAAACGGT GGAAGACACG GTGACGCAGG TGATCGAGCA GCAGATGAGC GGTCTCGACA ACTTCCTGTA CATGTCGTCG ACCAGCGACG ACTCGGGTAA CGCGACGATC ACGCTGACCT TCGCGCCGGG TACCAACGCC GACATCGCAC AGGTTCAGGT GCAGAACAAG CTGTCGCTCG CGACGCCGGT TCTGCCGCAG GTCGTGCAGC AGCTCGGCCT TTCGGTGACG AAGTCGAGCA GCAGCTTCTT GCTGGTGCTC GCCTTCAACT CCGAAGACGG CAGCATGAAC AAGTACGACC TCGCGAACTT CGTGGCGTCG CACGTGAAGG ACCCGATCAG CCGGATCAAC GGTGTCGGTA CCGTCACGCT GTTCGGCTCG CAGTATGCGA TGCGGATCTG GCTCGATGCC AACCGTCTGA CGAACTACGG CCTCACGCCG GTTGACGTGT CGACTGCGAT CGCCGCACAG AACGTGCAGA TCGCAGGCGG CCAGATCGGC GGCACGCCGT CCACGCCGGG CACGATGCTG CAAGCGACGA TCACCGAATC GACGCTGCTG CAGACGCCCG CGCAGTTCGG CGACATTCTG CTGAAGGTCA ACCAGGACGG CTCGCAGGTT CGCCTGAAGG ATGTCTCGAA GATCGAGCTC GGCGGCGAAA ACTACAACTT CGACACGAAG TACAACGGTC AGCCGACCGC GGCACTCGGG ATCCAGCTCG CGACCAACGC GAACGCACTG GCGACCGCGA AGGCCGTGCG CGCGAAGATC GACGAACTGG CACCGTTCTT CCCGCATGGC CTCGTCGTGA AGTACCCGTA CGACACGACG CCGTTCGTGA AGCTGTCGAT CGAGGAAGTG GTCAAGACGC TGCTCGAAGG TATCGTGCTG GTGTTCCTCG TGATGTATCT GTTCCTGCAG AACCTGCGGG CGACGATCAT CCCGACGATC GCGGTGCCGG TCGTGTTGCT CGGCACGTTC GCGGTCATGT CGGTGGTGGG GTTCTCGATC AACACGCTGT CGATGTTCGG CCTCGTGCTC GCGATCGGCC TGCTGGTGGA CGATGCAATC GTGGTGGTGG AGAACGTCGA GCGGGTGATG GCCGAGGAGG GCCTGTCACC GAAGGAGGCG ACCCGCAAGG CGATGGGCCA GATCACCGGC GCGCTGGTCG GTATCGCGCT CGTGCTGTCG GCCGTGTTCG TGCCGGTGGC GTTCTCCGGC GGGTCGGTCG GCGCGATCTA TCGTCAGTTC TCGCTGACGA TCGTGACGGC GATGGTGCTG TCGGTGCTCG TCGCGTTGAT TCTGACGCCG GCACTGTGCG CGACGATCCT CAAGCCGATC CCGCAAGGGC ATCACGAAGA GAAGAAGGGC TTCTTCGGCT GGTTCAACCG CACGTTCAAC AACAGCCGCG ACAAGTACCA CGTCGGCGTG CACCACGTGA TCAAGCGCTC GGGCCGCTGG CTCGTCATCT ACCTGGTCGT GATCATCGCG GTCGGCCTGC TGTTCGTGCG CCTGCCGAAG TCGTTCCTGC CGGATGAAGA CCAGGGCCTG ATGTTCGTGA TCGTGCAGAC GCCGTCGGGC TCGACGCAGG AAACGACCGC GAAGACGCTC GCGAACATTT CCGACTACCT GCTGAAGGAT GAGAAGGAAA TCGTCGAATC GGCGTTCACG GTCAACGGCT TCAGCTTCGC CGGCCGCGGC CAGAACTCCG GTCTCGTGTT CGTTCGCCTG AAGGACTATT CGCAGCGTCA GCATGCGAAC CAGAAGGTGC AGGCGCTGAT CGGCCGGATG TTCGGGCGCT ACGCGGGCTA CAAGGACGCG ATCGTGATCC CGTTCAACCC GCCGTCGATT CCTGAACTCG GTACGGCTGC CGGCTTCGAC TTCGAGCTGA CGGACAACGC GGGTCTCGGC CACGATGCAC TGATGGCCGC GCGTAACCAG CTGCTCGGGA TGGCCTCGAA GGATCCGACG CTGCAGGGCG TGCGCCCGAA CGGCCTGAAC GATACGCCGC AGTACAAGGT CAACATCGAC CGCGAGAAGG CGAATGCGCT CGGTGTGACG GCGGATGCGA TCGACCAGAC GTTCTCGATC GCATGGGCGT CGAAGTACGT GAACAACTTC CTCGATACCG ACGGCCGGAT CAAGAAGGTT TACGTGCAGG CAGACGCACC GTTCCGGATG ACGCCGGACG ACCTGAACAT CTGGTACGTG CGCAACGGGT CGGGCGGGAT GGTGCCGTTC AGCGCGTTCG CGACCGGTCA CTGGACCTAC GGTTCGCCGA AGCTCGAGCG CTACAACGGT GTGTCGGCGA TGGAAATCCA GGGCCAGGCT TCTCCGGGCA AGTCGACCGG TCAGGCGATG GCAGCGATGG AGCAGCTCGC GAAGAAACTG CCGGTCGGTA TCGGCTATTC GTGGACCGGC CTGTCGTTCC AGGAAATCCA GTCGGGTTCG CAGGCGCCGA TCCTGTACGC GATCTCGATC CTCGTCGTGT TCCTGTGTCT CGCGGCGCTG TATGAAAGCT GGTCGATCCC GTTCTCGGTG ATCATGGTGG TGCCGCTCGG CGTGATCGGC GCACTGCTCG CGGCAACGAT GCGCGGCCTC GAGAACGACG TGTACTTCCA GGTCGGCCTG CTGACTACAG TGGGCTTGTC TGCGAAGAAC GCAATTCTGA TCGTCGAGTT CGCCCGCGAG TTGCAGGTAA CCGAAAAGAT GGGGCCGGTC GAGGCCGCGC TGGAGGCGGC GCGTCAGCGG CTGCGTCCGA TCCTGATGAC GTCGCTCGCG TTCATTCTCG GTGTGATGCC GCTCGCGATC AGTAACGGCG CGGGTTCGGC CAGCCAGCAC GCGATCGGTA CGGGCGTGAT CGGCGGGATG CTGACGGCGA CGTTCCTCGC GATCTTCATG ATCCCGATGT TCTTCGTGAA GATCCGCGCG ATCTTCGCCG GCGAGAAGGA AGATGCCGAC GAAGCACTGC GTCTGGCTCA GGAGCACGCG CGCCATGAAG AGAAGCCGGG CAACGGCGAC GAAGGCAACA AGGGACAGTG A
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Protein sequence | MAKFFIDRPI FAWVIAIILM LAGVASIFTL PISQYPTIAP PSIQITANYP GASAKTVEDT VTQVIEQQMS GLDNFLYMSS TSDDSGNATI TLTFAPGTNA DIAQVQVQNK LSLATPVLPQ VVQQLGLSVT KSSSSFLLVL AFNSEDGSMN KYDLANFVAS HVKDPISRIN GVGTVTLFGS QYAMRIWLDA NRLTNYGLTP VDVSTAIAAQ NVQIAGGQIG GTPSTPGTML QATITESTLL QTPAQFGDIL LKVNQDGSQV RLKDVSKIEL GGENYNFDTK YNGQPTAALG IQLATNANAL ATAKAVRAKI DELAPFFPHG LVVKYPYDTT PFVKLSIEEV VKTLLEGIVL VFLVMYLFLQ NLRATIIPTI AVPVVLLGTF AVMSVVGFSI NTLSMFGLVL AIGLLVDDAI VVVENVERVM AEEGLSPKEA TRKAMGQITG ALVGIALVLS AVFVPVAFSG GSVGAIYRQF SLTIVTAMVL SVLVALILTP ALCATILKPI PQGHHEEKKG FFGWFNRTFN NSRDKYHVGV HHVIKRSGRW LVIYLVVIIA VGLLFVRLPK SFLPDEDQGL MFVIVQTPSG STQETTAKTL ANISDYLLKD EKEIVESAFT VNGFSFAGRG QNSGLVFVRL KDYSQRQHAN QKVQALIGRM FGRYAGYKDA IVIPFNPPSI PELGTAAGFD FELTDNAGLG HDALMAARNQ LLGMASKDPT LQGVRPNGLN DTPQYKVNID REKANALGVT ADAIDQTFSI AWASKYVNNF LDTDGRIKKV YVQADAPFRM TPDDLNIWYV RNGSGGMVPF SAFATGHWTY GSPKLERYNG VSAMEIQGQA SPGKSTGQAM AAMEQLAKKL PVGIGYSWTG LSFQEIQSGS QAPILYAISI LVVFLCLAAL YESWSIPFSV IMVVPLGVIG ALLAATMRGL ENDVYFQVGL LTTVGLSAKN AILIVEFARE LQVTEKMGPV EAALEAARQR LRPILMTSLA FILGVMPLAI SNGAGSASQH AIGTGVIGGM LTATFLAIFM IPMFFVKIRA IFAGEKEDAD EALRLAQEHA RHEEKPGNGD EGNKGQ
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