| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5808 |
|---|
| Symbol | |
|---|
| ID | 3751038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 2922256 |
|---|
| End bp | 2923413 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637764126 |
|---|
| Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_370046 |
|---|
| Protein GI | 78067277 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0834641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTTC CCGCCCTGTT GCGCCGCGCC GCCGCCGGCG CCCTCGTACT GGCCTGCGCC
ACCGCGCATG CCGACCTGAA GGTCGGCGTC GACCTGTCGT CGACCGGCCC GGCCGCCGCG
ATCGGCATCA CGAGCAAGAA CGCGATCCTG ATGTGGCCGA AGACGATCGC CGGGCAGCCC
GTCCAGGTGA CGGTGCTCGA CGACGCATCC GACCCGGGCA CCGCGGTGCG CAACATCCGC
AAGCTGGTGG ACGAGGATCA CGTCGACGTC GTGGTCGGGC CGAACATCAC GCCGGCCGCG
CTCGCGGCGC TCGATGCGGT GGCCGCCGGG CAGACGCCGA TGATCACGCT GGTCGGCTCC
GGCGCGATCG TCGAGCCGCA GGAAGGCGCG CGGACCTGGG CGTTCAAGAT GGCGCAGAGC
GACAGCGCGA TGGCCGACGT GATGACGCGC TATGTGGCGA ACCACGGCGT GAAGACGGTC
GGCTTCATCG GCTTCGCGGA CAGCTACGGC GACAGCTGGC TGAACGAGTT CACGCGCTTC
GCGGACCTGC GCAAGATCCG CGTGGTCGCG ACCGAGCGCT TCAACCGCAC CGATGCGAGC
GTCACGGGCC AGGCGCTGAA GCTGATCGCG GCGAAGCCCG ACGCGATCCT GATCGCGGGC
TCCGGCACGC CGGCCGTACT GCCGCAACGC ACGCTGATCG AACGCGGCTA CAAGGGCTCG
ATCTACCAGA CGCACGGGAT CGCGACGCCG GAATTCATCA AGCTCGGTGG CAAGGACGTC
GACGGGACGC TGTTCCCGAC CCAGCCGGTG GTCGTCGCGC GCACGCTGCC GGCCGATCAC
CCGGCCCGCA AGGCCGCGCT CGCGTTCGTC GACGCGTACG AAGCGAAGTA CGGCGCCGGC
ACGGTCACGC AGTTCGCGGG CGACGCGGCC GGTGTCTACC CGCGCCTCGC CGACGCGGTC
GGCCGCGCGC TGAAGGCCGC GCAGCCCGGC ACGCCCGCGT TCCGCGCGGC GCTGCGGCGC
GAGCTGGAAC GCGCGCACGA GCTCGTCGTG CCGAACGGCG TCGTCAACAC CAGCGACAAG
GATCACGTGG GACTCGACCA GCGTGCGAGC GTGATGGGGA TCGTCAAACA GGGCCGGTTC
GTCTACCTGA GCCAGTGA
|
|---|
| Protein sequence | MTLPALLRRA AAGALVLACA TAHADLKVGV DLSSTGPAAA IGITSKNAIL MWPKTIAGQP
VQVTVLDDAS DPGTAVRNIR KLVDEDHVDV VVGPNITPAA LAALDAVAAG QTPMITLVGS
GAIVEPQEGA RTWAFKMAQS DSAMADVMTR YVANHGVKTV GFIGFADSYG DSWLNEFTRF
ADLRKIRVVA TERFNRTDAS VTGQALKLIA AKPDAILIAG SGTPAVLPQR TLIERGYKGS
IYQTHGIATP EFIKLGGKDV DGTLFPTQPV VVARTLPADH PARKAALAFV DAYEAKYGAG
TVTQFAGDAA GVYPRLADAV GRALKAAQPG TPAFRAALRR ELERAHELVV PNGVVNTSDK
DHVGLDQRAS VMGIVKQGRF VYLSQ
|
|---|
| |