Gene Bcep18194_A5752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A5752 
SymbolhemC 
ID3750982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp2859314 
End bp2860318 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content71% 
IMG OID637764070 
Productporphobilinogen deaminase 
Protein accessionYP_369990 
Protein GI161702955 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCG AGACCCCTGC GGCCGGGCCG CAACAGGCAC AGCTGCCCGC GACGTTGACG 
ATTGCTTCGC GCGAGAGCCG CCTGGCGATG TGGCAAGCCG AACATGTGCG TGATGCGCTG
CGCAAATTAT ATCCAGCTTG TGACGTGAAC ATCCTCGGGA TGACGACGCG CGGCGACCAG
ATTCTCGATC GCACGCTGTC GAAGGTCGGC GGCAAGGGCC TGTTCGTGAA GGAACTGGAG
GCCGCGCTGG CCGACGGCCG CGCCGATCTC GCCGTGCATT CGCTGAAGGA CGTGCCGATG
GCGCTGCCCG ACGGCTTCTC GCTCGCCGCG ATCATGGAGC GCGAAGACCC GCGCGATGCA
TTCGTGTCGA ACGACTACGC GTCGCTCGAC GCGCTGCCGG CCGGCGCCGT GGTCGGCACG
TCGAGCCTGC GCCGCGAGGC GATGCTGCGC TCGCGCTATC CGCACCTGGA AGTGCTGCCG
CTGCGCGGCA ACCTCGATAC CCGCCTGTCG AAACTCGACC GCGGCGACTA CGCGGCGATC
ATCCTCGCGG CTGCCGGCCT GAAGCGCCTC GGCCTCGAAA CGCGGATCCG CGCGTTGCTC
GACGTCGAGG CGAGCCCGCC CGCCGCAGGC CAGGGCGCGC TCGGCATCGA GATCGCATCG
CACCGCAGCG ACGTCGCCGC GTGGCTCGCA CCGCTGCACG ACCCGCAGAC CGCGCTCGCG
GTCGAGGCCG AGCGGATGGT GTCGCGCGCG CTCGGCGGCA GCTGCGAGGT GCCGCTCGCC
GCGCACGCGG TGTGGCGCGC GGGCGAACTG TACCTCACCG GCCGCGTGTC GACGACCGAC
GGCAAGCGTG TGCTGACGGC CGAGGAGTGC GGGGCCGTCG TGACCGTCGC CGATGCGCTC
GCGCTCGGCC GCGCCGTGTC CGACGAACTC GAGGCGCAAG GCGCGCTCGA CATCGTCCAG
GCGCTGCTCG CGGGCTCGCC GCCCGCCGGC AAGGGCGACG CCTGA
 
Protein sequence
MNSETPAAGP QQAQLPATLT IASRESRLAM WQAEHVRDAL RKLYPACDVN ILGMTTRGDQ 
ILDRTLSKVG GKGLFVKELE AALADGRADL AVHSLKDVPM ALPDGFSLAA IMEREDPRDA
FVSNDYASLD ALPAGAVVGT SSLRREAMLR SRYPHLEVLP LRGNLDTRLS KLDRGDYAAI
ILAAAGLKRL GLETRIRALL DVEASPPAAG QGALGIEIAS HRSDVAAWLA PLHDPQTALA
VEAERMVSRA LGGSCEVPLA AHAVWRAGEL YLTGRVSTTD GKRVLTAEEC GAVVTVADAL
ALGRAVSDEL EAQGALDIVQ ALLAGSPPAG KGDA