| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5512 |
|---|
| Symbol | |
|---|
| ID | 3750733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2602957 |
|---|
| End bp | 2605665 |
|---|
| Gene Length | 2709 bp |
|---|
| Protein Length | 902 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637763821 |
|---|
| Product | Rhs element Vgr protein |
|---|
| Protein accession | YP_369750 |
|---|
| Protein GI | 78066981 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGG GGCCTGCTCA GAAAACGCTC GAGCAGGTGC TCGCGCTCCA GTATGCGGAC
ATCCGCGAAG GGTTGATGAC GGGCATCGAG GGACATCTGA CCTGCGTGTC CGCGCGGGCC
GATCTCCCGA TCCGCAGCTT TATCGGGCTA CCGGTTTCCG TCGAGATGAC GACCGATCGC
GGGCGTCTCC ATACCATCAA CGGCATCGTT ACCGACGTCC GTACCGGGCA GTCGGACGGT
TCACTGACCT GCTACCAGTT GACGGTTCGC GACGTGCTGT CGGTCATGGA GCGGCGAATC
AATTCGCGAC TGTTCCGCAC CAAGAACCTG CCCGACATCC TCGGCGTGCT GCTGCAGGAG
TGGCGCCAGC GCAGCTCGGC GCTGGCGGGC GCATTTGAGT TCGACCTGTC CGGCCTGCAA
GGCGAACGTT ACCCGGCGCG CGAACTCACG CGGCAGGTCA ACGAGTCGGA CGCGCACTTC
ATCCGGCGGC TGCTGCGGCG CGACGGTGCG ACCGTCTTCG TCAAGGCAGG CAAGGCCGGC
GAGCGGGCGA ACGGCAACGC GAACGACACG CCGGTTCATA CGCTGGTCTT TGCCGACGAT
TCGATGAAGT TGCCCGAGAC GCTTGCCGGT ACCGTGCGCT ATCACCGCGA CGCCGCCACC
GAAGAGCGCG ACTCGATCAC ACTGTGGGCG ACGAGCCGCA GCCTGATCCC GGGCAAGATC
GTCCGGCCGA CGTGGGATTA CAAGACCGGC CGGATGTCGC AAACCGAACA GGCGACGATC
GTCGACCAGG GCGACGGCGG CAACGATCTC GGGCATTTGC TGGCCGACAG CGTCATCGAT
ATTCCGCACG CGGGAAATTC GTCGTCCGAT CTCGACCGGA TCGGCAAGGA CCGCATGCTT
GCGCACGAAC TGCGCGCGGA ATCCGTCGAC GGCGTGAGCA ACGTGCGCGA TCTGGCCGTC
GGCCACTGGT TTGCGCTCGC CGAGCATCCG CAGCTCGACA CATTGCCGGC CGAGCAGCGG
CAGTTCGTCG TCACGTCGCT TCATCACCGG GTACGGAACA ACCTGCCGAA GGAGCTGAAC
GAGCGCGCGC AGTCGCTGTT CGCGGCAAGC CGCGTGCTGT TCAACGCGGT GCCGACCGAC
GTGAACAGCA AGCCAGGCGA TGAAAACGAC CGGCGCTACG AGAACACGTT CTCGTGCGTG
CGACGCGGCG TGCCGCTGAC CCCGGCCTAC GATCCCCATG TCGACCTGCC GGCCGTGCAT
CCGATGACGG CCGTCGTCGT CGGACCCGAC GGGGAAGAGG TGTTCTGCGA TGAAATGGGC
CGCATCCGGG TGCAGATCCA GGGGCTGAAC GCGGACGATC ACGCGCATGC GCAAGGCGCC
GGCACGAGCG GCACGCCGAC CGACAGCGCG CCGGTGCGAG TCGCCTGCGC ACTCGCCGGG
CCGAGCTTCG GCGCGAATAC CTTGCCGCGT GTCGGCATGG AGGTGCTGAT CGGCCATATC
GGCGGCGATC CGGACCGGCT CGTCGTGATG GGCGTGCTGG CCAACGGGCC GAACATGCCG
GCGACCTTCA GCCACACCGG CGCACTGCCG GGCAACCGTT ACCTGTCCGG CACGAAGACG
AAGGAAATCA AGGGGCAGCG GTACAACCAG ATCCGCTTCG ACGATACGCC GGGGCAGATC
AGCAGCCAGC TGGCGAGCGA GCATGCGCAT AGCCAGCTGA ACCTCGGTTA TCTGACGCAG
CCGCGCGACA ACGGCCAGGG CACGGCGCGT GGCGAGGGCG CCGAGTTGCG CAGCGATGCG
CATGTGGCGA TCCGCAGCGG CAAGGCGATG CTGATTTCGG CCTGGGAACG GCTGCGCGCG
AGCGACGGCC ACCTGGCGCG GGACGAGTAT CTGCAACTGA TGCAGGAATG CGTCGAGCTG
TTCAAGAGTC TCGGCGACTA TGCGGGCCAG CATCAGGGCG TGGTGCCCGA TACGCAGCCG
CACGACGCGC TGATGACCAC GGTGAAAGGC TGGCCGAACG GGGAAGCCGC CGGTGGCGGT
GAGGCGTCGG GCGCGTCGAT GGCGGCGATC GGCATCACCG CGCCGGCCGG GATCAGCATC
GCGACGCCGA AGACCGTCGC GACCCATGCG GGCGGCAACG TCGATATCGT CGCGCAGAAC
CATTTGCAGT ACACGAGCGG GCAGCGGATC AACCTGCAGG CCGGCCATGG CGTGGCGATG
TTCGCGCACA GCGAAGGGGT CTCGGCGATC GCCAACCAGG GGAAGGTGAC GCTGCAGAGC
CAGAACGACG ACACGCAGAT CGATTCGGCG AAAAACATCC AGATGACGGC GGGGGGCGGA
AAGCTCGCGG GCATGGCCAG CGAGCAAGTC GTGTTCGTGA CGTCGGGCGG CGCGTATCTG
AAGCTGCAGG GCGGGGATAT CGAGCTCGGG TGTCCGGGGA GTTTCACCGT CAAGTCCGCG
TCGCATACGT GGGCCGGGCC GGCGAGCATG AGCGCCGATT TCCCGAAGTT CGACCAGGGC
TCGCTGGGAC GGGTGCCGAA ACTGGTCCGG GCGACCGACG GGCAGCCGGT CGAAGGGATG
GAAGCCGAGG TGCGCAAGGC ATCGGGCGAA TTGATCAAGG GGAAGACCGA CGCGGAAGGC
AAGCTGGCGC CGGTCAGCAG CGATCAGTTC GAACAATTGG CGGTGCGCTT CTTCAAGTCG
AGAACCTGA
|
|---|
| Protein sequence | MNWGPAQKTL EQVLALQYAD IREGLMTGIE GHLTCVSARA DLPIRSFIGL PVSVEMTTDR
GRLHTINGIV TDVRTGQSDG SLTCYQLTVR DVLSVMERRI NSRLFRTKNL PDILGVLLQE
WRQRSSALAG AFEFDLSGLQ GERYPARELT RQVNESDAHF IRRLLRRDGA TVFVKAGKAG
ERANGNANDT PVHTLVFADD SMKLPETLAG TVRYHRDAAT EERDSITLWA TSRSLIPGKI
VRPTWDYKTG RMSQTEQATI VDQGDGGNDL GHLLADSVID IPHAGNSSSD LDRIGKDRML
AHELRAESVD GVSNVRDLAV GHWFALAEHP QLDTLPAEQR QFVVTSLHHR VRNNLPKELN
ERAQSLFAAS RVLFNAVPTD VNSKPGDEND RRYENTFSCV RRGVPLTPAY DPHVDLPAVH
PMTAVVVGPD GEEVFCDEMG RIRVQIQGLN ADDHAHAQGA GTSGTPTDSA PVRVACALAG
PSFGANTLPR VGMEVLIGHI GGDPDRLVVM GVLANGPNMP ATFSHTGALP GNRYLSGTKT
KEIKGQRYNQ IRFDDTPGQI SSQLASEHAH SQLNLGYLTQ PRDNGQGTAR GEGAELRSDA
HVAIRSGKAM LISAWERLRA SDGHLARDEY LQLMQECVEL FKSLGDYAGQ HQGVVPDTQP
HDALMTTVKG WPNGEAAGGG EASGASMAAI GITAPAGISI ATPKTVATHA GGNVDIVAQN
HLQYTSGQRI NLQAGHGVAM FAHSEGVSAI ANQGKVTLQS QNDDTQIDSA KNIQMTAGGG
KLAGMASEQV VFVTSGGAYL KLQGGDIELG CPGSFTVKSA SHTWAGPASM SADFPKFDQG
SLGRVPKLVR ATDGQPVEGM EAEVRKASGE LIKGKTDAEG KLAPVSSDQF EQLAVRFFKS
RT
|
|---|
| |