| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5322 |
|---|
| Symbol | |
|---|
| ID | 3750533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2374567 |
|---|
| End bp | 2375937 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637763621 |
|---|
| Product | peptidase RseP |
|---|
| Protein accession | YP_369560 |
|---|
| Protein GI | 78066791 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.430006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.522456 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGC TGGTCGAACT GATCGCGTTT GCGGTGGCGA TCGGGGTGCT GGTCGTCGTG
CATGAGTACG GACACTATCG CGTCGCGCGC TGGTGCGGCG TGAAGGTGCT GCGTTTCTCG
ATCGGCTTCG GCCAGCCTGT CGCGCGCTGG GTCAGCCGCA GGACGGGCAC CGAGTGGACG
CTGTCGGCGC TGCCGCTCGG CGGCTACGTG AAGATGCTCG ACGAGCGCGA TCCCGGCCCC
GGCATCCCGC CCGAGGAGCT CGGCCAGGCG TTCAACCGGC AGTCCGTCTA CAAGCGCATC
GCCATCGTCG CGGCGGGCCC GATTGCCAAC TTCCTGTTGG CAATTGCGCT GTTTTCCATC
GTATTTGCCA CCGGTGTAAC CGAGCCGACC GCGATCGTCG CACCGCCGGC CGCCGGCACG
GTGGCGGCGC GCGCGGGCTT CGACGGCAAC GAGAAGATCG TGTCGATCCG CAACGCGCAG
GGCGGCGAGT CCGAACCGGT GCGATCGTGG TCGGACCTGC GCTGGAAGCT GCTGGCGGCT
GCGTTCGACC ACCGCGAGAT CGTGCTCGGC GCGCGCGACG GCAACACGAC GTTCGATTTC
CGCGTCGACC TCCGCAATGT TCCCGAAAGT CAGCTCGACG ACGATTTCAT GGCCCATCTG
GGCTTCGAGG CCGGCGGCGG CACGCTGTCG GTCGAGTCGG TGCAGCCCGG CAGCGCGGCG
GAGCAGGCGG GCCTGAAGTC CGGCGACAAG CTGGTCGCGC TCGACGGCAA GCCGATCGGC
GGCGCGTCAC GCTTCATCGA TTTCGTGAAA CACCATGCGG GCAAGCCGCT CGACCTGCAG
ATCGAGCGCA ATGGCGCCGC ACAGACGGTG TCAATCGTGC CGCAGATGCA GCGCGACGAC
GAATCGGGGC AGCAGATCGG CCGGATCGGC GCGGCGCTGT CGATGCATGC GCCGTCGGTC
GACGTGCGAT ACGGGCCGAT CGACAGCCTG CGGCTCGGCG CGCACCGCAC GTGGGACATC
TCCGTGTATT CGCTGAAGAT GTTCGGGCGC ATGATCACGG GCAATGCGTC GCTGAAGAAC
CTGTCCGGCC CGGTGACGAT CGCGGACTAC GCGGGCAAGA GTGCGCGGCT CGGTCCGTCG
GCGTTCCTGT CGTTCCTCGC CCTTGTCAGC ATTAGCCTTG GCGTCCTGAA CTTGTTGCCG
ATTCCCGTTT TGGACGGGGG GCATCTGTTA TATTATGCGG TTGAAGCCGC GACCGGGAAA
GCCGTCTCGG AGCGCTGGCA GCTGATTCTG CAAAGAGCCG GGTTGATCTG CATCGTCGCA
TTGTCGGCGA TCGCGCTGTT CAACGATCTG GCTCGGTTAA TCCATTTCTG A
|
|---|
| Protein sequence | MNVLVELIAF AVAIGVLVVV HEYGHYRVAR WCGVKVLRFS IGFGQPVARW VSRRTGTEWT
LSALPLGGYV KMLDERDPGP GIPPEELGQA FNRQSVYKRI AIVAAGPIAN FLLAIALFSI
VFATGVTEPT AIVAPPAAGT VAARAGFDGN EKIVSIRNAQ GGESEPVRSW SDLRWKLLAA
AFDHREIVLG ARDGNTTFDF RVDLRNVPES QLDDDFMAHL GFEAGGGTLS VESVQPGSAA
EQAGLKSGDK LVALDGKPIG GASRFIDFVK HHAGKPLDLQ IERNGAAQTV SIVPQMQRDD
ESGQQIGRIG AALSMHAPSV DVRYGPIDSL RLGAHRTWDI SVYSLKMFGR MITGNASLKN
LSGPVTIADY AGKSARLGPS AFLSFLALVS ISLGVLNLLP IPVLDGGHLL YYAVEAATGK
AVSERWQLIL QRAGLICIVA LSAIALFNDL ARLIHF
|
|---|
| |