Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A5094 |
Symbol | |
ID | 3750302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 2133248 |
End bp | 2134456 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637763390 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_369332 |
Protein GI | 78066563 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.760184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTT CAAGTTCGCA GAATGCCCAG CCGGGCACAC CAAATCGCGA AGATTATAGC CCAAGCGATC GGCCCGCCGA CGCTGCCTCG GGGGATTCCC TCGATGACGA TCTGACCGGC GACGCAATGC AGCCGCCCGT CGTGCCGTCC GCAGCGGTCG ATGAAGCGCC GCGCGTCGTC GAAGTGCCGC TGTCGCTCGC GGGCGAACGC CTCGACAAGG CGCTCGCCCA ACTGTTCCCC GAATTCTCGC GCAGCCGCCT GCAGAGCTGG ATCGAGGCGC AGCGCGTGCT CGTCGACGGC GCGCCCGCGA AGATCCGCCA GCCGGTGCCG CTCGGCGCGA AGATCCAGCT CGTCCCCGAC CTGCTCCCCG AGCAGCTCGC CTTTACGCCG GAGCCGGTGC CGCTCGACGT GATCTACGAG GACGACGCGC TCGTCGTCAT CAACAAGCCG GCCGGCCTCG TCGTGCATCC GGCCGCCGGC AACTGGAGCG GCACGATCCT CAACGGGCTG CTGCACCGCT ATGGCGACGC TGCGGCCGGC CTGCCGCGCG CAGGGATCGT CCACCGGCTC GACAAGGAAA CGTCGGGCCT GATGGTGGTG GCGCGCACGC TGGCCGCGCA GACGGACCTC GTGCGCCAGT TGCAGGCCCG CACTGTGAAG CGCCGCTATT TTGCGCTGGT GTGGGGCACG ATGCCCGAGG AAGGCACGAT CGATGCGCCG ATCGGCCGCG ATCCGCGAGA ACGCACGCGC ATGGCCGTCG TCACGGGCGC ATCGGGCAAG CCCGCGCGCA CGCATTTCCG CACGGTTGAC ACATGCCTGT GGCAACGTCA GCCGGTTTCG GCGATTCAGT GCGATCTCGA GACCGGTCGC ACGCACCAGA TCCGCGTGCA CTGCGCGCAT GCCGGGCATC CGCTGCTCGG CGATCCCGTG TACGGGCGTG CGCGCGGCAA GCGCTCGGTC ACGCCGCTGC CGGACGGGTT CGCGCGACAG GCGCTGCATG CATGGCGGCT CGGTCTCGTG CATCCGGTCA CGGGCAAGGC GATGCAATGG CGCTGCCCGC TGCCGGACGA CATGAACACG CTGGTCGCGG CGCTCGGCTT CGGGCAAGGC GACGAGGAAT TCGGCGACGA TGACGGTGTC TACGACGATG ACGATTTCGG CGGCGAGTAT CACGATGACG AGCCGTACCT GGACGATGAG GAGGAGTGA
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Protein sequence | MTRSSSQNAQ PGTPNREDYS PSDRPADAAS GDSLDDDLTG DAMQPPVVPS AAVDEAPRVV EVPLSLAGER LDKALAQLFP EFSRSRLQSW IEAQRVLVDG APAKIRQPVP LGAKIQLVPD LLPEQLAFTP EPVPLDVIYE DDALVVINKP AGLVVHPAAG NWSGTILNGL LHRYGDAAAG LPRAGIVHRL DKETSGLMVV ARTLAAQTDL VRQLQARTVK RRYFALVWGT MPEEGTIDAP IGRDPRERTR MAVVTGASGK PARTHFRTVD TCLWQRQPVS AIQCDLETGR THQIRVHCAH AGHPLLGDPV YGRARGKRSV TPLPDGFARQ ALHAWRLGLV HPVTGKAMQW RCPLPDDMNT LVAALGFGQG DEEFGDDDGV YDDDDFGGEY HDDEPYLDDE EE
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