| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5048 |
|---|
| Symbol | |
|---|
| ID | 3750256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2085386 |
|---|
| End bp | 2086312 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637763344 |
|---|
| Product | ABC spermidine/putrescine transporter, inner membrane subunit |
|---|
| Protein accession | YP_369286 |
|---|
| Protein GI | 78066517 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.145296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGT TCAAGTCCCT GCTCGAGTGG CCGGTGCGGC GCTTCAACCT GACGGGCGCC
ACGGCGGTCG TCGCCGGGCC GTTCACGTGG CTCGTGCTGT TCTTCCTCGT GCCGTTCGTG
CTGGTCGTCA AGATCAGTTT CGCGGAGCTG CAGCTCGGCA TCCCGCCGTA CACGGAACTC
GCGTCGTACA CCGACGGCGT CGTGCACGTC GCGCTGAACC TGTCGCACTA CGCGTTCCTG
TTTACGGACA GCCTGTATTT CGCGACCTAC GTGAACTCGG TGTGGGTGGC CGCGATCACG
ACGCTGCTGT GTTTGCTGAT CGGCTATCCG ATGGCGTACT ACATCGCGCG CTCGAACCCG
GCGACCCGCA ACCTGCTGAT GATGGGCGTG ATGTTGCCGT TCTGGACGTC GTTCCTGATC
CGCGTGTACG CGTGGATCGG CATCCTGAAG AACAACGGGC TGCTGAACAA CTTCCTGATG
TGGATCGGCC TCACGCATAC GCCGATCGAG CTGTATCGCA CCAACTACGC GGTGTACATC
GGGATGGTGT ATTCGTACCT GCCGTTCCTC GTGATGCCGC TGTACGCGCA CCTCGTGAAG
ATGGACCTGC GCCTGCTCGA AGCCGCGTAC GACCTCGGCG CCAAGCCGTG GAAGGCGTTC
GTGCAGATCA CGCTGCCGCT GTCGAAGAAC GGGATCATCG CGGGCTGCCT GCTCGTGTTC
ATCCCGGCGG TCGGCGAGTA CGTGATCCCC GAGCTGCTCG GCGGCGCGAA CACGCTGATG
ATCGGCCGCG TGATGTGGAA TGAATTCTTC AACAACGCAG ACTGGCCGAT GGCGTCGGCG
GTGACCTGCG CGATGGTGCT GCTGCTGCTC GTGCCGATGG CGATGTTCCA GCACTTCCAG
GCGAAAGAGC AGGGAGGCCG TCGATGA
|
|---|
| Protein sequence | MTTFKSLLEW PVRRFNLTGA TAVVAGPFTW LVLFFLVPFV LVVKISFAEL QLGIPPYTEL
ASYTDGVVHV ALNLSHYAFL FTDSLYFATY VNSVWVAAIT TLLCLLIGYP MAYYIARSNP
ATRNLLMMGV MLPFWTSFLI RVYAWIGILK NNGLLNNFLM WIGLTHTPIE LYRTNYAVYI
GMVYSYLPFL VMPLYAHLVK MDLRLLEAAY DLGAKPWKAF VQITLPLSKN GIIAGCLLVF
IPAVGEYVIP ELLGGANTLM IGRVMWNEFF NNADWPMASA VTCAMVLLLL VPMAMFQHFQ
AKEQGGRR
|
|---|
| |