| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5042 |
|---|
| Symbol | |
|---|
| ID | 3750250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2078751 |
|---|
| End bp | 2080133 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637763338 |
|---|
| Product | sigma-54 dependent trancsriptional regulator |
|---|
| Protein accession | YP_369280 |
|---|
| Protein GI | 78066511 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGC ACGACACCAT CCCGATCGTC CCCGCGCCGC GCCACGACGT CATGCCCGAC
GTACGCGCGC TCGTCGCGTA TCTCGAGCAG GATCCGCAGC CGATGATCGT CGTCGATCCC
GACTACCGCA TCCTCGCGGC GAACGATGCG TACCGGCGCC AGTTCGGCGT CGCGGGCGTC
GAGCATGTGG GCCGGCACTG CTTCCAGGTC TCGCATCACT ACGACGTGCC GTGCGATCAG
GCCGGCGAGC ATTGCCCGAT GAAGCAGGCG CTCGAATCGC GCGGGTTGAA CCGCGTGCTG
CACATCCATC ACACGCCGCG CGGCCCCGAA CATGTCGACG TCGAATTGCG GCCGATCTTC
GATGCACACG GCAACGTGAT CGCGTATGTC GAGCGGCTGA CGACGGTGCG CAGCGCGTCC
GCGCAGCCGA GTGCGGAAGG GCTCGTCGGC GGCGCGGACG CATTCAACGC GGCGCTCGGC
GCATTGCAGC GCGTCGCGCC CTCGATGCTG CCGGTGCTGC TGCTCGGTGA ATCGGGCACC
GGCAAGGAGC TGTTCGCCCG CGCGCTGCAC GAGGCGAGCG ATCGCGCGAT GGGGCCGTTC
GTCGTCGTCG ATTGCTCGGG GATCGCCGAG ACGCTGTTCG AGAGCGAACT GTTCGGTTAC
GAGAAGGGCG CGTTCACGGG TGCGAACCAG CGCAAGCCGG GCCTCGTCGA AACCGCACAG
GGCGGCACGC TGTTTCTCGA CGAGATCGGC GACGTGCCGC TGCCGATGCA GGTGAAGCTG
CTGCGGCTGA TCGAGTCGGG CACGTTCCGC CGTGTCGGCG GCGTCGAGGC GCTGCGTGCG
GATTTCCGGC TGGTCGCGGC GACGCACAAG CCGCTGCGCG AGATGATCGA CGACGGCCGG
TTCCGGCAGG ACCTCTACTA CCGGATCAAT GCGTTTCCGA TTCCGTTGCC GGCGCTGCGC
GACCGGCGCG GGGACGTCGC GCTGCTGGCC GAATCGATCC TGCGGCGGAT CGCGAACGCG
CGCGCCAGTG CGGGCGACGC GAGCGCGCGG CCATTCGTGC TGACCGAGCG CGCACGTGCG
TGTCTCGATG CGTATGCGTG GCCGGGCAAC ATTCGCGAGC TGCGCAACGT GCTCGAACGC
GCGTGCCTGT TCGCGGACGA CGGGACGATC CGCGTCGAGC ATCTGCCGGC CGAGCTGGTC
GCCGCATCGG CGGCGCCGCA GGACCGGACG GCCGATGCGC GCGGCATGTC GGACGCGGAG
CTCGTGCGCA TCGCGCGCAC GTTCGACGGC ACGCGCAAGG CGCTCGCCGA GCAGGTCGGG
ATGAGCGAGC GGACGTTGTA CCGGCGGATG AAGGCGCTTG GGCTCGGGAC GCGCGAGCGC
TGA
|
|---|
| Protein sequence | MNPHDTIPIV PAPRHDVMPD VRALVAYLEQ DPQPMIVVDP DYRILAANDA YRRQFGVAGV
EHVGRHCFQV SHHYDVPCDQ AGEHCPMKQA LESRGLNRVL HIHHTPRGPE HVDVELRPIF
DAHGNVIAYV ERLTTVRSAS AQPSAEGLVG GADAFNAALG ALQRVAPSML PVLLLGESGT
GKELFARALH EASDRAMGPF VVVDCSGIAE TLFESELFGY EKGAFTGANQ RKPGLVETAQ
GGTLFLDEIG DVPLPMQVKL LRLIESGTFR RVGGVEALRA DFRLVAATHK PLREMIDDGR
FRQDLYYRIN AFPIPLPALR DRRGDVALLA ESILRRIANA RASAGDASAR PFVLTERARA
CLDAYAWPGN IRELRNVLER ACLFADDGTI RVEHLPAELV AASAAPQDRT ADARGMSDAE
LVRIARTFDG TRKALAEQVG MSERTLYRRM KALGLGTRER
|
|---|
| |