| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4674 |
|---|
| Symbol | |
|---|
| ID | 3749877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 1665005 |
|---|
| End bp | 1666759 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637762966 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_368913 |
|---|
| Protein GI | 78066144 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0112629 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCTT CCGCAGCAAC CGCAGCGGCC CAGGTTCCGC CGAACACCGA CGGCATCTGG
TACGCGTCAT ACCCGCCCGG CGTCCCGCAC GAGATCGACG TCACGCAATA CGCATCGCTC
GTGCAGTTCT TCGACGAATG CACGAGCCGC TTCGCCGAAC GCGTCGCCTA CGTGAGCGCA
GGCGCATCGA TGACCTATCG CACGCTCGCG CAGAAAGTCG ACGCGTTCGC GTCGTACCTG
CAAAGCATCG GCATCAAGCC CGGCGACCGC GTCGCGATCA TGCTGCCGAA CACGTTCCAG
TACCCGGTCG CGCTGTTCGG CACGCTGAAG GCCGGCGCGA TCGTCGTCAA CGTCAATCCG
CTCTACACCG TGCGCGAACT CGCGCACCAG CTGAAGGACA GCGGCGCGCA GACGATCGTC
GTGTTCGAGA ACTTCGCGCG CACGCTGCAG GACGCGCTGC CGGAAACGCA GGTGAAGAAC
ATCGTCGTCA CCGCGCTCGG CGACCTGCTC GCCGACGGCT TCAATGCGAA AGGACGCCTG
ATCAATTTCG TGCTGAAGCA CGTGAAGAAG CTCGTGCCGG CCTACCATCT GCCGCAGGCC
ATCCGGTTGC GCTCCGCCCT TGCGCTCGGT GCGCGCGGCA AGCCGCAGCC CGTGCAGATC
ACGCGCGACG ACCTCGCGTT CCTGCAATAC ACGGGCGGCA CGACCGGCGT CGCGAAAGGC
GCGATGCTCA CGCACGGCAA CCTGATCGCG AACCTGCTGC AGGCGAAGGC GTGGATCGCC
GACCAGGTCT CGGGCGATGT CGAAACCGTG CTCACGCCGC TGCCGCTGTA TCACATCTAT
TCGCTGACGG TGAACGCGTT CATCTTCATG GGGCTCGGCG GGCGCAACAT CCTGATCGCG
AACCCGCGCG ACATGACGAT GGTGATGAAG ATCATCCGCA ACGAGACGTT CACCGGGATC
ACCGGCATCA ACACGCTGTA CAACGCGTTC CTCGACAACG AGGAATTCCG CAAGCGCGAT
TTCTCGAAGC TCAAGCTCGC GATGGCCGGC GGGATGGCGA TGCAGCGCGC GGTCGCGGAG
CGCTTCCAGC AGGTGACAGG CCGGCCGGTC GTCGAAGGCT ACGGCCTGAC CGAATGCTCG
CCGATCGTCA CGATGAATCC CGTGGACCTG AACGACATGG CCGCATTCAG CGGTTCGATC
GGCCTGCCCG CGCCGTCCAC CGTCGTGCGC TTTCGCCGCG AGGACGGCAC CTGGGCGCCC
ATCGGCGAAC CGGGCGAGCT GTGCGTGCAT GGTCCGCAGG TGATGCGCGG CTACTGGCAG
CGCCCCGACG AGACGACCAA GGTGATCGAC GCCGACGGCT GGCTCGGCAC CGGCGACATC
GGCGTGATGG ACGAACGCGG CTTCATCCGC CTGATCGACC GCAAGAAGGA CATGATCCTC
GTGTCGGGCT TCAACGTGTA TCCGAACGAA ATCGAGGAAG TGCTGGTGAT GCATCCGGGC
ATCAGCGAAG CCGCGGCGAT CGGCATTCCT GACGAGGTAC AGGGCGAACG GATCAAGGTG
TTCGTCGTGC GCCGCGACCC GTCGCTGACG GTCGACGACG TCCTCGCGCA CTGCCGCAAG
AACCTGACCG GCTACAAGAT GCCGAAATTC GTCGAGTTCC GCGACGCGCT GCCGCAGACG
AACGTCGGCA AGATCCTGCG CCGCGCGCTG CGCGACGAGG AGCTCGCCAA AATCAAGGCC
GCGAAGCAAG GCTGA
|
|---|
| Protein sequence | MSSSAATAAA QVPPNTDGIW YASYPPGVPH EIDVTQYASL VQFFDECTSR FAERVAYVSA
GASMTYRTLA QKVDAFASYL QSIGIKPGDR VAIMLPNTFQ YPVALFGTLK AGAIVVNVNP
LYTVRELAHQ LKDSGAQTIV VFENFARTLQ DALPETQVKN IVVTALGDLL ADGFNAKGRL
INFVLKHVKK LVPAYHLPQA IRLRSALALG ARGKPQPVQI TRDDLAFLQY TGGTTGVAKG
AMLTHGNLIA NLLQAKAWIA DQVSGDVETV LTPLPLYHIY SLTVNAFIFM GLGGRNILIA
NPRDMTMVMK IIRNETFTGI TGINTLYNAF LDNEEFRKRD FSKLKLAMAG GMAMQRAVAE
RFQQVTGRPV VEGYGLTECS PIVTMNPVDL NDMAAFSGSI GLPAPSTVVR FRREDGTWAP
IGEPGELCVH GPQVMRGYWQ RPDETTKVID ADGWLGTGDI GVMDERGFIR LIDRKKDMIL
VSGFNVYPNE IEEVLVMHPG ISEAAAIGIP DEVQGERIKV FVVRRDPSLT VDDVLAHCRK
NLTGYKMPKF VEFRDALPQT NVGKILRRAL RDEELAKIKA AKQG
|
|---|
| |