Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A4645 |
Symbol | |
ID | 3749848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 1629703 |
End bp | 1630917 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637762937 |
Product | HlyD family secretion protein |
Protein accession | YP_368884 |
Protein GI | 78066115 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.109619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.493066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC AACAAAACGC CGCCGGCGCG CAGCCGCAGA ACAACGGCAA GCGCAAACGG ATGATGACGC TGCTCATCGC GGTCATCGTG ATCGCGGCCA TCGCGTATGG CCTGTACTAC TTCCTCGTCG CCCGCTTCCA TGAAGGGACC GACGACGCGT ACGTGAACGG CAACGTCGTG CAGATCACGC CGCAAGTCAC CGGCACCGTG ATCGCGGTGA AGGCCGACGA TACGCAAACG GTCAAGGCCG GCGATCCGCT CGTCGTGCTC GACCCGGCCG ACTCGCAGGT CGCGCTGCAG CAGGCCGAAG CCAATCTCGC ACAAACGGTG CGCCAGGTGC GCGGCCTGTT CGTCAACGAT GATCAGTACC GCGCTCAGGT CGCGCTGCGC CAGTCCGACC TGTCGAAGGC CGAGGACGAC CTCCGCCGCC GCGTGGCCGT CGCACAGACG GGCGCCGTGT CGCAGGAAGA AATCTCGCAC GCTCGCGACG CCGTTCGCGC CGCCCAGGCA TCGCTTGACG CCTCACAGCA GCAACTCGCA TCGAACCGCG CGCTGACCGC CAACACGACG ATCGCCTCGC ATCCGAACGT GATGGCTGCG GCCGCGAAGG TTCGCGACGC GTACCTGGCA AACGCGCGTA ACGTGCTGCC CGCGCCGGTC ACCGGCTATG TCGCGAAGCG CTCGGTGCAG GTCGGCCAGC GCGTGTCGCC AGGCACGCCG CTGATGTCGG TGGTGCCGCT GAACGCAGTG TGGGTCGATG CGAACTTCAA GGAAGTGCAG CTCAAGCACA TGCGCATCGG CCAGCCGGTC GAACTGACGG CCGACATCTA TGGCTCGTCG GCGGTCTACC ACGGCAAGGT GGTCGGCTTC TCGGCCGGTA CGGGCTCGGC ATTCTCGCTG CTGCCCGCGC AGAACGCGAC GGGTAACTGG ATCAAGGTCG TGCAGCGCCT GCCGGTGCGG ATCGAACTCG ATCCGAAGGA TCTCGACAAG CACCCGTTGC GCATTGGCCT GTCGATGCAG GTCGACGTGG ACATCAAGGA CGAACGCGGC GACCAGCTCG TGAACGCGCC GAACACCGTC TACGAGACCA ACGTGTTCGC GAAGTACGGC GACGAAGCCG ATGCCGAAAT CGCCCGCGTC ATTGCCGAGA ACGCAGGCAG CAACGCATCG GCGCCGGCCG CGTCGAAGTC GAATGCCGTC GCGAAGATGA TGTAA
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Protein sequence | MSDQQNAAGA QPQNNGKRKR MMTLLIAVIV IAAIAYGLYY FLVARFHEGT DDAYVNGNVV QITPQVTGTV IAVKADDTQT VKAGDPLVVL DPADSQVALQ QAEANLAQTV RQVRGLFVND DQYRAQVALR QSDLSKAEDD LRRRVAVAQT GAVSQEEISH ARDAVRAAQA SLDASQQQLA SNRALTANTT IASHPNVMAA AAKVRDAYLA NARNVLPAPV TGYVAKRSVQ VGQRVSPGTP LMSVVPLNAV WVDANFKEVQ LKHMRIGQPV ELTADIYGSS AVYHGKVVGF SAGTGSAFSL LPAQNATGNW IKVVQRLPVR IELDPKDLDK HPLRIGLSMQ VDVDIKDERG DQLVNAPNTV YETNVFAKYG DEADAEIARV IAENAGSNAS APAASKSNAV AKMM
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