Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A4489 |
Symbol | |
ID | 3749690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | + |
Start bp | 1454270 |
End bp | 1456360 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637762780 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_368729 |
Protein GI | 78065960 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.515859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGACCT CGGGCGCGAT GGCCGCCGAA GCGGCCGCAC CCGCACCGGA CGAGCGGCAT GCGCTGCCGG CGATCAACGT CAGCGCGCAC GCCGCACCGG TCGACCCGCT GATGCAACCG CTCGAAACGG GCTCGCGGCT CGGGCTTGCG AGCCTCGACA CGCCCGCGAG CGTCGAGACG GTCACGGCCG ACACAATCGA CGCGCGCGGC GATCGCACGG TGCTCGATGC GGTGACGCGC ACCGCGGGGT TCTCGAGCGC GATGGCGCCC GGCACCGGCG GCACCGCCTT GAGCGTGCGC GGCTTCAGCG GGCAGGAATC GGTGATGACG CTGCTCGACG GCGTGCGGCT GATGCCGGCC GCCGGCACGA TCACGTTCCC GTTCGATACG TGGTCGGTCG AGCGCATCGA GGTGTTGCGC GGCCCGGCGT CGGCGCTGTA CGGCGAAGGG GCGATCGGCG GTGTCGTGAA CGTGGTGCCG AAGCGGCCCC AGCGCACGCG CGAGACGACG CTGCAGATCG GTGTCGGCCC CGACGGCGCG AAGCGCGCCG CGTTCGATAC GACGGGCGCG CTCGGCCCGC AGCTGTCGTA TCGCTTCTAC GCGAGCGATG CGCGCGCGAA CGGTCTCGCC GAGCGGGCCG ATACGCATAC GACGGCCGTC GGTGGCGCGC TGAAATTCGA CGTGAGCCCG AAGCTCACGC TGACGCTCGA CTTCGACTAC GGCCGCCAGA TGCCGGCGAC CTACTATGGC GTGCCGGCGC CGAACGGCGT GCTCGATCCG TCGCTGCGCA AGCTCAACTA CAACGTGGGC GATGCGACGA TTTCCTACTA CGACCAGTGG ACGCGCCTGT CGGCCAGCTA CCGGCCGACG GCCGGCGTGA CGATCGACAA CCAGCTCTAC TACCTGACGT CGAACCGCCA CTGGCGCAAT GCCGAATCGT ATGCGCTCGA TGCCGCGACG GGTCTCGTCA CGCGCAGCGA CTATCTCGAC ATCGGCCACC ATCAGCGGCA GATCGGCGAT CGGCTGAGCG CCCGCTTCGA CGGGACGCTG TTCGGCCGCG CGAACCGCTT TGTCGTCGGC ACGGAATTCA GCCAGATCAC GTTCAGCGGG ACCAACAATT CGCCGTACGG CGGTGAATCG ACGGTGCCCG CGCACGGCTT CGATCCCGGC GTGTTCACGA GCCCCGACCC GACGGTGCCG CAGTTCAGCA CGCGGGCGCG GCAGGCCGCG GTGTTCGCCG AGAACCGGCT CGAAGTGCTG CCGCGGCTCG CGTGGGTGAG CGGCCTGCGC TACGACCACA TCGCGTTCAG CCGCGAGCAG GCGGCAACCG GTGCGGGCTT CGACAAGCGT TTCGCGAATG TCGGCTGGCG CACGGGCTTC GTGTTCGAAG TCGCGCCGAC GCTCAGCGCG TATGCGCAGT ACACGACGGG CGCGGAGGGC CTCGGTTCGC TCGTGACGCT GTCCGCGTCG CAGGCGAACT ACCGGCTCGC GACCGGCGAA CAGTGGGAAG CCGGCGTCAA GCAGACGCTG CTCGACGGCC GCGCATACTG GACGTTCGCC GTGTACGACA TCACGAAGCG TAACCTGCTG AGCACCGATC CGTTCAATCC CGCGCTGCGC CAGCAGGTCG GCCGGCAATC GTCGCGCGGC ATCGAGCTGA CGGGCGGCGC GCGGCTGCCG CACGGCTGGA CGGTCGATGC GAACGTCGCG CTGCTGCGCG CGCGCTATGA CGAGTTCAAC CAGAAGGTCG GCAGCGCGAC GGTGTCGCGC GCCGGCAATG CGCCGGCCAA CGTGCCGCAG CAGACGGCGA ACCTGTGGCT CGGCTGGGCG TTTGCCGAGC GCTGGCAGGC GAACGCGGGC GTGCGTTACG TCGGCGCGAC GTACGGCGAC GACGCGAACC GCGTGCAGGT GCCGTCGTAC ACGGTGTTCG ATGCGTCGCT GCGCTGGCAG CCGACGTCAC GCACCGAGCT CGCGCTCTAC CTGCGCAATC TCGCGAACCG CACGTATGCG GTGACGACGT CGAACGGCGG CGAGCAGTGG CTGCTCGGCC CGTCGCGTTC GGCGGAGCTC GTCGCGACGA TGCGCTTCTG A
|
Protein sequence | MATSGAMAAE AAAPAPDERH ALPAINVSAH AAPVDPLMQP LETGSRLGLA SLDTPASVET VTADTIDARG DRTVLDAVTR TAGFSSAMAP GTGGTALSVR GFSGQESVMT LLDGVRLMPA AGTITFPFDT WSVERIEVLR GPASALYGEG AIGGVVNVVP KRPQRTRETT LQIGVGPDGA KRAAFDTTGA LGPQLSYRFY ASDARANGLA ERADTHTTAV GGALKFDVSP KLTLTLDFDY GRQMPATYYG VPAPNGVLDP SLRKLNYNVG DATISYYDQW TRLSASYRPT AGVTIDNQLY YLTSNRHWRN AESYALDAAT GLVTRSDYLD IGHHQRQIGD RLSARFDGTL FGRANRFVVG TEFSQITFSG TNNSPYGGES TVPAHGFDPG VFTSPDPTVP QFSTRARQAA VFAENRLEVL PRLAWVSGLR YDHIAFSREQ AATGAGFDKR FANVGWRTGF VFEVAPTLSA YAQYTTGAEG LGSLVTLSAS QANYRLATGE QWEAGVKQTL LDGRAYWTFA VYDITKRNLL STDPFNPALR QQVGRQSSRG IELTGGARLP HGWTVDANVA LLRARYDEFN QKVGSATVSR AGNAPANVPQ QTANLWLGWA FAERWQANAG VRYVGATYGD DANRVQVPSY TVFDASLRWQ PTSRTELALY LRNLANRTYA VTTSNGGEQW LLGPSRSAEL VATMRF
|
| |