Gene Bcep18194_A4287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A4287 
Symbol 
ID3749486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp1225183 
End bp1225872 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID637762577 
ProductABC polar amino acid transporter, inner membrane subunit 
Protein accessionYP_368528 
Protein GI78065759 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCTTT ACGGCTTTGG TCCTGTCCTC TGGGCCGGCA CCGTGCAGAC CATCGAGCTG 
TCGGTGCTGT CGCTCGCCAC TGCGGTGGCG CTGGGGCTGA TCGGCGCGGT GGCGAAGCTG
TCGCACAACC GGGTGCTGCG AGCGATCGCG ACCGGTTATA CGACGCTGAT CCGCTCGGTG
CCCGATCTCG TCCTGATGCT GCTGTTGTTC TACAGCATCC AGATCTGGCT GAACCAGTTC
ACCGACTTCG TCGGCTGGGA CCAGATCGAC ATCGACCCGT TCGTGGCCGG CGTGCTGACG
CTCGGCTTCA TCTACGGCGC GTACTTCACC GAGACGTTCC GCGGCGCGTT CCTGTCGGTG
CCGCGCGGCC AGCTCGAAGC CGGTGCGGCT TACGGGATGA GCGGCGCACG CGTGTTCGCG
CGGATCATGT TTCCGCAGAT GATGCGCTTC GCGCTGCCCG GGATCGGGAA CAACTGGCAG
GTGCTCGTGA AGGCGACCGC GCTGGTGTCG ATCATCGGCC TCGCGGACGT CGTGAAGGCC
GCGCAGGACG CCGGCAAGAG CACGTTCAAC ATGTTCTTCT TCATCCTCGT CGCGGCGCTG
ATCTATCTCG CGATCACGAC CGTTTCCAAC CTCGTGCTGA TCCAGCTCGA GAAGCGTTAT
TCCATGGGCG TGCGGCACGC AGATCTATGA
 
Protein sequence
MFLYGFGPVL WAGTVQTIEL SVLSLATAVA LGLIGAVAKL SHNRVLRAIA TGYTTLIRSV 
PDLVLMLLLF YSIQIWLNQF TDFVGWDQID IDPFVAGVLT LGFIYGAYFT ETFRGAFLSV
PRGQLEAGAA YGMSGARVFA RIMFPQMMRF ALPGIGNNWQ VLVKATALVS IIGLADVVKA
AQDAGKSTFN MFFFILVAAL IYLAITTVSN LVLIQLEKRY SMGVRHADL