| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4227 |
|---|
| Symbol | |
|---|
| ID | 3749422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 1163464 |
|---|
| End bp | 1164456 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637762513 |
|---|
| Product | peptidase S49 |
|---|
| Protein accession | YP_368468 |
|---|
| Protein GI | 78065699 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.224148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACC AACCGAATTC CCCGGATTCC TCCTCCCGTC CCGACAGCCG TGAACCGAGC
TGGGAGCGTG CGGCGCTCGA GCGGATCGCG CTCGCGGCCG TGAAGGAGCA GCGCGCGGCG
CGGCGCTGGA AGATCTTCTT CCGTTTCGCG TTCCTCGCCG TGTTCGTGCT GTTCGCGTTC
GCGCTGATCG ATTTCTCGAG CGATTCGAAG TTCTCGTCGA GCGGGCGGCA TACGGCGCTC
GTGACGATCG ACGGCGAGAT CGCGGCCGGC GTCAACGCAA ACGCCGACGA CATCAACACG
GCGCTAGATG CCGCGTTCGA CGACGACGGC ACGGCCGGGG TCGTGCTGCG GATCAACAGC
CCGGGCGGCA GCCCGGTGCA GGCCGGGATG GTGTACGACG AGATTCGCCG GCTGCGCGCG
AAGTATCCGG ACAAGCCGCT GTACGTCGTC GTGACCGACA TGTGCGCATC GGGCGGCTAT
TACATCGCGT CCGCGGCCGA CAAGATCTTC GTCGACAAGG CGAGCATCGT CGGCTCGATC
GGCGTGCTGA TGGACGGGTT TGGCTTTACT GGCCTGATGG GCAAGCTCGG TGTCGAGCGG
CGCCTGCATA CGTCGGGTGA AAACAAGGGC TTCTACGACC CGTTCTCGCC GGAAACGCCG
AAGATGGACG CACATGCGCA GGCGTTGCTC GATCAGGTGC ACGCGCAGTT CATCAAGGCC
GTGAAGGATG GCCGCGGCAA GCGGCTGCAC GAGACGCCCG ACATGTTCTC GGGCCTGTTC
TGGACTGGCG AGAAGAGCGT CGAGCTCGGG CTGGCAGACG GCTACGGCAC GACTGACACG
GTCGCGCGCG ACGTGCTGAA GGCGCCTGAT CTTGTCGACT ATACGGTGAA GGAAAGCCTG
ACGAACCGCG TCGCGCGCAA GTTTGGCGCG GCCGTCGGCG GCGCCGCGAT GAAGGCGCTG
ACGGCCGGCG GCGCGTCGGT CAGCTTGCGC TGA
|
|---|
| Protein sequence | MADQPNSPDS SSRPDSREPS WERAALERIA LAAVKEQRAA RRWKIFFRFA FLAVFVLFAF
ALIDFSSDSK FSSSGRHTAL VTIDGEIAAG VNANADDINT ALDAAFDDDG TAGVVLRINS
PGGSPVQAGM VYDEIRRLRA KYPDKPLYVV VTDMCASGGY YIASAADKIF VDKASIVGSI
GVLMDGFGFT GLMGKLGVER RLHTSGENKG FYDPFSPETP KMDAHAQALL DQVHAQFIKA
VKDGRGKRLH ETPDMFSGLF WTGEKSVELG LADGYGTTDT VARDVLKAPD LVDYTVKESL
TNRVARKFGA AVGGAAMKAL TAGGASVSLR
|
|---|
| |