| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4224 |
|---|
| Symbol | |
|---|
| ID | 3749419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 1161384 |
|---|
| End bp | 1162388 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637762510 |
|---|
| Product | pseudouridine synthase, RluD |
|---|
| Protein accession | YP_368465 |
|---|
| Protein GI | 78065696 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.613812 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGT TAGGCAAAAT ATCCCAGAAT TCGGTCGCAA GCGGCCAGGT ATCGATGCTC
GAGATCGACG AAAGCTCGGT CGGTCAGCGT ATCGACAATT TCCTTTTGCG CGTCTGTAAA
GGCGTGCCGA AAAGCCATAT TTACCGGATC CTTCGCAGCG GCGAAGTGCG CGTGAATAAG
GGTCGGGTCG ACGCGCAGTA CCGACTCGCG TTCGGCGACA TCGTCCGCGT GCCACCCGTC
CGCGTGGCCG CAGCCGACCT CGCGCGCGCC GAAGCCACCA TCGTGCCGCC CGCGCACTTC
GACGTGCTGT TCGAGGACGA CGCGATGCTC GTCATCAACA AGCCGGCCGG GGTCGCGGTC
CACGGCGGCA GCGGTGTCGC GTTCGGCGTG ATCGAGCAGA TGCGCCAGGC GCGCCCGCGC
GCGAAATTCC TCGAACTCGT GCACCGGCTC GACCGCGAGA CGTCCGGGGT CCTGATGCTC
GCGAAGAAGC GCACGGCGCT GGTGGGCCTG CACGAACAGA TCCGCGAGAA CAAGATGGAC
AAGCGCTACT TCGCGTGCGT CCACGGTGAA TGGCAGTCCG ACTGGGGGCG TCGCCGCGCG
GTGAAGGCGC CGCTGTTCAA GTATTCGACC CCGGAAGGGG AGCGCCGCGT GCGTGTGCAG
GACGACGGGC TGCCGTCGCA CACGGTGTTC AACCTCGTCG ACCTTTGGCC CGAGTACGCG
CTTCTCGAAG CGGAACTCAA AACGGGTCGG ACCCATCAGA TCCGTGTGCA CCTCGCGCAT
CTCGGCCTGC CGATCGCCGG CGACGCCAAG TATGGCGATT TCGCACTGAA CAAGGCGCTG
GCGCGCGCGA ATGCGCAGCC GTCGTTGAAA CGGATGTTCC TGCATGCGTA CCGGCTGCGG
CTCGCTCACC CGTTGACCGG TGAGGCACTG CAGTTCGATG CGCCGCTGCC GGACGAATGC
CGGCGCTTCC TCGACCAACT CAGCGCACTG CGCGATACCG CCTGA
|
|---|
| Protein sequence | MNELGKISQN SVASGQVSML EIDESSVGQR IDNFLLRVCK GVPKSHIYRI LRSGEVRVNK
GRVDAQYRLA FGDIVRVPPV RVAAADLARA EATIVPPAHF DVLFEDDAML VINKPAGVAV
HGGSGVAFGV IEQMRQARPR AKFLELVHRL DRETSGVLML AKKRTALVGL HEQIRENKMD
KRYFACVHGE WQSDWGRRRA VKAPLFKYST PEGERRVRVQ DDGLPSHTVF NLVDLWPEYA
LLEAELKTGR THQIRVHLAH LGLPIAGDAK YGDFALNKAL ARANAQPSLK RMFLHAYRLR
LAHPLTGEAL QFDAPLPDEC RRFLDQLSAL RDTA
|
|---|
| |