Gene Bcep18194_A4109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A4109 
Symbol 
ID3749297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp1036845 
End bp1039211 
Gene Length2367 bp 
Protein Length788 aa 
Translation table11 
GC content65% 
IMG OID637762389 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_368350 
Protein GI78065581 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000167102 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.377291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CCCCATCGTC CGCCTCCGCG GATTCGACCA CCGAAGCCAC GGCCCAGTCG 
CCTGCGCGCC AGTACATCGA CGCGGTCCTC GAACAGTCCT TCCGGCATCT GTTCGGGCCG
ACCGCGACAC CGGAGCAGCC TCGCAAGCAC GGCGTCGTTT CGATCGCGAA ACTGACGGCC
GCGCTTGCCG AGTATCTTCC TCCGGAAGAA ATCAAAGAGG TCAAGGCGGC ATTCCACTTC
AGCGACGAAG CCCACCTCGG TCAATATCGC CAGAGCGGCG AGCCCTACAT CACCCATCCT
GTCGCCGTTG CGGAAATCTG CGCCGGCTGG AAGCTCGACG CGCAGGCCGT GATGGCAGCG
CTCCTGCACG ACGTGATGGA AGATCAGGGC GTGACCAAGA GCGAGCTGGC CGAACGGTTC
GGCCCGAAGG TCGCCGAACT GGTCGACGGC CTGTCGAAGC TCGACAAGAT GGAGTTCCGC
AGCCGCGAGG AAGCGCAGGC GGAAAACTTC CGCAAGATGC TGCTCGCGAT GGCACGCGAC
GTGCGCGTCA TTCTCGTCAA GCTCGCCGAC CGCCTGCACA ACATGCGCAC GCTCGGCGCG
GTGCCGATGG AAAAGCGCCG CCGCGTCGCG CGGGAAACGC TCGACATCTA CGCGCCGATC
GCGCACCGCC TCGGGTTGAA CAACACGTAT CGCGAGCTGC AGGACATGAG CTTCGCGAAC
TTCAACCCGC ATCGCTACGC GACGCTCGAG AAGGCCGTGA AGGCCGCGCG CGGCAATCGC
CGCGAAGTGA TCAGCAAGAT CCTCGAGGCC GCGCAGCGCG CGATGGCCGA CGCGAAGATC
GACGCCGAGA TCACCGGCCG CGAAAAGACC ATCTACAGCG TGTACCGCAA GATGCGCGAC
AAGCAGCTGT CGTTCTCGCA GGTGCTCGAC GTGTACGGCT TTCGCGTCGT CGTCGACAGC
CCGCTCGACT GCTACACGTG CATCGGCGCG CTGCACGCGC TGTACAAGCC CGTGCCCGGC
AAGTTCAAGG ACTACATCGC GATCCCGAAG ATCAACGGCT ATCAGTCGCT GCACACGACG
CTCGTCGGCC CGTTCGGCGC GCCGATCGAG TTCCAGGTGC GCACGCGCAA GATGCACGAG
ATCGCCGAGG CGGGGGGCGC CGCGCACTGG CTGTACAAGA ACGGCAGCGC GGATCTCAGC
GACGTGCAGA AGCGCGCGCA CCAGTGGCTG AAGTCGCTGC TCGACATCCA GAGCGAAGCC
GGCGATTCGA GCGAATTCCT CGAGCACGTG AAGATCGACC TGTTCCCGGA TGCGGTCTAC
GTGTTCACGC CGAAGTCGAA GATCATGGCG CTGCCGCGCG GCGCGACGGC ACTCGATTTC
GCGTATTCGA TCCACAGCGA TCTCGGCAAC CAGTGCGTGG CCGTGAAGAT CAACAACGAA
CTGCTGCCGC TGCGCACCGA GCTGAAGAGC GGCGACATCG TCGAGGTGAT CACCGCGCCG
TATTCGAAGC CGAACCCAGC GTGGCTCGGC TTCGTGCGTA CCGGCAAGGC GCGCTCGGCG
ATCCGGCACT ACCTGAAGAC GATGCGCCTG AACGAATCGG TGCAGCTTGG CGAGCGGCTG
GTCGACCAGA GCCTGAAGGG CTACGGTCTT GCGCTGGCCG ATGTCGAGCC GGAAGTGTGG
GAGAAGCTCG TGCAGTGGAC GGGCAACAAG AGCCGTCAGG AAATCTTCGC GGACATCGGC
CTCGGCCGTC GCGTGGCCGC GGTGATGGCC AAGCGCATCG AGGTGCTGAT GAGCGGCCGC
GATGCGGACG ACGATCTGCC GAAGTCCGAG CGGCATCCCG CGCACCATGC GCCGCCGGTC
GTGATTACCG GCACCGAAGG GATGTCCGTG CAGTTGTCCG CGTGCTGCCG GCCGATTCCG
GGCGACGCGA TCATGGGCTA TATCGGCATT GGCCTGGGGA TGGCGATTCA TACGACCGAT
TGCCGCGTGG CGCAGCGTAT TCATCGCCGC GATCCGGGCC GCTGGATCGA TGTCGAATGG
GCGCCGCAGC CGGGCCGCCT GTTCGATGTC GCCGTGAAGG CGCTCGTGAA GAACACGAAG
GGCATCTTTG CGCGCGTGGC GGCGGATATC ACGTCGGCCG ATGCGAACAT CGTGCACATT
GCGATGGACG AGGATCTGAC GCACGAATCG ACGGTGCTGC GCTTCGTGAT CCAGGTCAGC
GATCGCGTGC ATCTCGCGAA CGTGATGCGG CGCGTGCGCA CCAATCCGGA TGTGATGCGG
ATCATGCGCG AGCGTTCGAC CGACGACGGC GCGCATGCGC GCCACGACGG TGGCATGCGC
ATCGAGCGCG AGCGGCAGGA TTATTGA
 
Protein sequence
MSTTPSSASA DSTTEATAQS PARQYIDAVL EQSFRHLFGP TATPEQPRKH GVVSIAKLTA 
ALAEYLPPEE IKEVKAAFHF SDEAHLGQYR QSGEPYITHP VAVAEICAGW KLDAQAVMAA
LLHDVMEDQG VTKSELAERF GPKVAELVDG LSKLDKMEFR SREEAQAENF RKMLLAMARD
VRVILVKLAD RLHNMRTLGA VPMEKRRRVA RETLDIYAPI AHRLGLNNTY RELQDMSFAN
FNPHRYATLE KAVKAARGNR REVISKILEA AQRAMADAKI DAEITGREKT IYSVYRKMRD
KQLSFSQVLD VYGFRVVVDS PLDCYTCIGA LHALYKPVPG KFKDYIAIPK INGYQSLHTT
LVGPFGAPIE FQVRTRKMHE IAEAGGAAHW LYKNGSADLS DVQKRAHQWL KSLLDIQSEA
GDSSEFLEHV KIDLFPDAVY VFTPKSKIMA LPRGATALDF AYSIHSDLGN QCVAVKINNE
LLPLRTELKS GDIVEVITAP YSKPNPAWLG FVRTGKARSA IRHYLKTMRL NESVQLGERL
VDQSLKGYGL ALADVEPEVW EKLVQWTGNK SRQEIFADIG LGRRVAAVMA KRIEVLMSGR
DADDDLPKSE RHPAHHAPPV VITGTEGMSV QLSACCRPIP GDAIMGYIGI GLGMAIHTTD
CRVAQRIHRR DPGRWIDVEW APQPGRLFDV AVKALVKNTK GIFARVAADI TSADANIVHI
AMDEDLTHES TVLRFVIQVS DRVHLANVMR RVRTNPDVMR IMRERSTDDG AHARHDGGMR
IERERQDY