Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A3958 |
Symbol | |
ID | 3749143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 880616 |
End bp | 881083 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637762237 |
Product | hypothetical protein |
Protein accession | YP_368201 |
Protein GI | 78065432 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.161152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0988998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGG ACATTTTCCT GAAACTGACC GGCATCAGAG GTGAATCTCA AGATGCCTTT CATCTGGACG AGATCGACGT ATTGGCGTGG GATTGGTCCG CAGATCAGTC GTCTACCACG CGCACGGGTG GCAAATGCAC GGCCAATGAC CTGACCATTG AACATTATGT TGATCGCGCA TCGCCGATTC TCATGCTGCA TTGCCTGAAA GGAAATCACA TCGAGAACGC CGTTCTGGTA ATGCGTAAGG CCGGCGGCAT GCCCCTGGAA TACCTCAAGA TCACGATGGA TAAGGTATTG ATCACGCGGG TCAACTCGGC CGCAAATTTG AACATGGTCA GGCCGCGAGA GGAGGTCCAA CTTTCATTCG CCGGCATCCG GCAGGAATAT GTCGTTCAGA ACGCCCAAGG AGGGAGCGGC GGAACTGTCG AAGCAGGATA CGACATCAAA ACCGGCAAAA CGACCTGA
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Protein sequence | MAQDIFLKLT GIRGESQDAF HLDEIDVLAW DWSADQSSTT RTGGKCTAND LTIEHYVDRA SPILMLHCLK GNHIENAVLV MRKAGGMPLE YLKITMDKVL ITRVNSAANL NMVRPREEVQ LSFAGIRQEY VVQNAQGGSG GTVEAGYDIK TGKTT
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