| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3889 |
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| Symbol | tolB |
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| ID | 3749074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | - |
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| Start bp | 805671 |
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| End bp | 806966 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637762168 |
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| Product | translocation protein TolB |
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| Protein accession | YP_368132 |
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| Protein GI | 78065363 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.53422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGA TGACAAAGCT AGGTTTCAGG GCACTCGTGG CCTCGTGTCT GATTACGGCG
GGCAGCGCCG CTAACGCCCA GGTCAACGTG CTGATCACCG GTGTCGGGTC GACCCAGTTC
CCCATCGCCA CCGCGAATTT CGCGAACGAG GCGAACCTGC CGCAGCAGGT CACGTCGATC
GTGCGCGCCG ACCTCGCCCG CAGTGGCAAA TTCACCAACA TCGACGCAGG CAGCACACCC
GTGCCGGAGT CCGCATCGGT CGATCTCGGC GCATGGAAGG CCAAGGGCGC GAATGCGTTC
GTCGCCGGCA GCGTAAACCG CGAGGCGAAC GGCCAGTACA AGGTCAACTT CATCCTGTAC
GACACCGTGA AGCAGCAAAG CCTCGGCGGC CTGTCGCTGA CGGCCACCGA CACCACGCTG
CGCACGGCCG GCCACAAGAT CGCCGACTAC ATCTACCAGA AGCTTCTCGG CGTGCGCGGC
GTGTTCGCCA CGCGCCTGTC GTACGTGATC AAGACCGGTA ACCGCTACCA GCTGCAGATT
TCGGATTCGG ACGGCCAGAA CGCGCGTATC GCACTGTCGA GCACCGAGCC GATCATCTCG
CCGTCCTGGT CGCCGAGCGG CACGAAGGTC GCGTACGTGT CGTTCGAGCG CAAGAAGCCG
ATCGTCTACA TCCACGACCT GCCGACCGGC CGTCGCTACA TCGTCTCCGA CCAGAAGGGC
AACAACAGCG CACCGGCGTG GTCGCCGGAC AGCAACACGC TGGCCGTCGC GCTGTCGCTG
ACGGGCAATA CGCAAATCTA TACGGTCAAC TCGACGGGCG GCGGCCTGCG CCGCCTCACG
CAGAGCAGCT CGATCGACAC CGAGCCGTTC TACTCGCCGG ATGGCCACTG GATCTACTTC
ACGAGCGATC GCGGCGGCGC GCCGCAGATC TACCGGATGC CCGCACAGGG CGAAAGCGCC
GGTGCTGCGC AGCGCGTGAC TTTCACCGGC AGCTACAACA CGAGTCCGCG CATCAGCCCG
GACGGCAAGC TGCTTGCCTA CATCTCCCGC ACGGGCGGGG GCTTCAAGCT GTACGTTCAG
GATCTGCAGT CTGGCGCGGC GAACGCCATC ACGAATACGA ATCGCGACGA ATCGCCGAGC
TTCGCGGCAA ACGGCCAGTA CCTTCTGTAC GCTACCCAGT CGGGTGGTCG CAATGTTCTG
GCAGCAGTGC CCTCCGACGG CAGCGCGCCG CCGCAAATCC TGTCCGTCCA GGGCGGCTCC
GTACGTGAGC CGTCGTGGGG GCCCTTCATG CAATGA
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| Protein sequence | MSLMTKLGFR ALVASCLITA GSAANAQVNV LITGVGSTQF PIATANFANE ANLPQQVTSI
VRADLARSGK FTNIDAGSTP VPESASVDLG AWKAKGANAF VAGSVNREAN GQYKVNFILY
DTVKQQSLGG LSLTATDTTL RTAGHKIADY IYQKLLGVRG VFATRLSYVI KTGNRYQLQI
SDSDGQNARI ALSSTEPIIS PSWSPSGTKV AYVSFERKKP IVYIHDLPTG RRYIVSDQKG
NNSAPAWSPD SNTLAVALSL TGNTQIYTVN STGGGLRRLT QSSSIDTEPF YSPDGHWIYF
TSDRGGAPQI YRMPAQGESA GAAQRVTFTG SYNTSPRISP DGKLLAYISR TGGGFKLYVQ
DLQSGAANAI TNTNRDESPS FAANGQYLLY ATQSGGRNVL AAVPSDGSAP PQILSVQGGS
VREPSWGPFM Q
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