Gene Bcep18194_A3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3852 
SymbolmiaA 
ID3749036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp758934 
End bp759908 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content71% 
IMG OID637762130 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_368095 
Protein GI78065326 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.224148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.912128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CACCGCACGC CAGCCCGACG ACGATCGCCT GCCTGCTCGG CCCCACCGCA 
TCGGGCAAGA CGGCCGCGGC GCTGGCGCTC GCCGCGCGCC GCCCGATCGA GATCGTCAGC
GTCGATTCGG CGCTCGTCTA CCGCGACATG GATATCGGCA CCGCGAAGCC TTCGCGCGAC
GAGCGCGCGA GCGTGCCGCA TCACCTGATC GACATCATCG ATCCGGCCGA CGCGTATTCG
GCCGCGAGCT TCCGCGCGGA CACGCTGCGC CTGATCGGCG AGATCGCCGC GCGTGGCCGC
ACACCGCTGC TCGCGGGCGG CACGATGCTG TACTACAAGG CGCTGACGCA GGGGCTCAAC
GACCTGCCAG GCGCCGATCC GGATGTGCGC GCGACACTCG ATGCCGAAGC CGAGCGTGAC
GGCTGGCCCG CGCTGCACGC GCGGCTCGCG CAAGTCGATC CCGACACGGC CGCACGGCTC
GCGCCGAACG ACTCGCAGCG GATCCAGCGG GCGCTCGAAG TGTTCATGCT GAGCGGGCAG
CCGATGTCGG TACTGCTCGC CGCGCCGCGC CGCACGGACG ATGCGGCCGC CGCTTACCGC
TTCGTGCCGG TCGCGCTCGA ACCGTCGGAT CGCGCGGTAC TGCACAAACG GATCGCACAG
CGCTTCGACG CGATGCTAGA CGCAGGCTTC ATCGACGAAG TCGAGCGACT GCGCCGACGC
GAGGACCTCC ATCCCGACCT GCCGTCGATG CGCTGCGTCG GCTACCGGCA GGCGTGGGAA
TTCCTCGACG GCGACACCGA CTACCGGACG ATGCGCGACA AGGGCATCTT CGCGACGCGC
CAGCTCTGCA AGCGCCAGAT CACCTGGCTG CGCGCGATGC CGGAGCGGAT CGTCGTCGAC
TGCATCGCAC CGGACTCGAC GGCCCGCGCA CTCGACGCGC TCGAACGCGT GCTCGACGGC
AGCACGCCGG GCTGA
 
Protein sequence
MSAAPHASPT TIACLLGPTA SGKTAAALAL AARRPIEIVS VDSALVYRDM DIGTAKPSRD 
ERASVPHHLI DIIDPADAYS AASFRADTLR LIGEIAARGR TPLLAGGTML YYKALTQGLN
DLPGADPDVR ATLDAEAERD GWPALHARLA QVDPDTAARL APNDSQRIQR ALEVFMLSGQ
PMSVLLAAPR RTDDAAAAYR FVPVALEPSD RAVLHKRIAQ RFDAMLDAGF IDEVERLRRR
EDLHPDLPSM RCVGYRQAWE FLDGDTDYRT MRDKGIFATR QLCKRQITWL RAMPERIVVD
CIAPDSTARA LDALERVLDG STPG