Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A3729 |
Symbol | |
ID | 3748913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 619100 |
End bp | 620299 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637762009 |
Product | major facilitator transporter |
Protein accession | YP_367974 |
Protein GI | 78065205 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.487409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.452524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCGC ATCACGACAC CCATCCTCCC CTCACCCGCG GCATGACGCT GCTGTTCGCC TGCGCGTGCG GCATCGTCAT CGGCAACATC TATTACGCGC AGCCGCTGCT CGCCGCGATC GCGCGCAGCT TCGGGCGCGC GCCGACCGAG CTCGGCTATC TCGTCACGCT GACGCAGCTC GGCTACGCGG CAAGCCTGCT GCTGATCGTC CCGCTCGGCG ACGCGGTCAA CCGTCATACG CTGATCGTGC GGCTGTTGAT GCTCAACGTC GTCGCGCTGG TCGCGGTCAC GTTCAGCACG AACTTCACGA TGTTCGTCGT CGCGAACATC GCGGTCGGCT TCGTCACCTG TTCGACGCAG CTGCTCGTGC CGTTCGCCGC ATCGCTCGCC GACGCACGCT CGCGCGGCCG CGCGGTCGGC ACCGTGATGA GCGGGCTGCT GCTCGGCATC CTGCTCGCGC GCGTCGCGGC CGGTGCGATC GCCGACGGGT TCGGCTGGCG CGCGGTGTAC GGCATCGCTG CGGTGATGGT GGCGGTGCTG ACCGTCGTGC TCGCCGTGAA GCTGCCGAAG GATCGCCGCG ATGCGCGCCT CGACTATGCG GCGCTGATGA AGTCGCTCGT CGCGCTGGTG CGCGCGCAAC CGCTGATCGC GCTGCGCTCG ACCTACGGCG CGCTCGTGTT CGCATGCTTC AGCCTGCTGT GGACGGGCCT CACGTTCCTG CTGAGCCAGC CGCCGTACAG CTATTCCGAA GGGCAGATCG GCCTGTTCGG CGTCGTTGGC GCAGTGGGTG CGCTCGCGGC GACGTCGGCC GGCCGGCTCG TCGATCGCGG GCACGGCAAT GCGGCGACGG GGCTGTTCGC GGCGGCGGTG CTCGCATCGT TCGCGCTGAT CGCGACCGGC GCGCACTCGC TCGCCGCGCT GATCGCGGGC ATCCTGCTGC TCGACGTCGG CGTGCAGGGC ATGCACATCT CGAACCAGAG CGTGATCTAT GCGCTGGCCG GCAACGCACG CAGCCGCGTG ACGACGATCT ACCTGACGAG CTACTTCATC GGCGGGGCGT TCGGGTCGTT CGCGGCGAGC GTCGCGTACG GCATCGACGG CTGGCGCGGC GTGTGTATCG CGGGCGCGGC GCTGTCGGGT GTGCTGATCG TGCTGTGGCT CGCATCGCAG CGCGTCGGCG TGCGGCAGGT CACGCAGTAA
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Protein sequence | MEPHHDTHPP LTRGMTLLFA CACGIVIGNI YYAQPLLAAI ARSFGRAPTE LGYLVTLTQL GYAASLLLIV PLGDAVNRHT LIVRLLMLNV VALVAVTFST NFTMFVVANI AVGFVTCSTQ LLVPFAASLA DARSRGRAVG TVMSGLLLGI LLARVAAGAI ADGFGWRAVY GIAAVMVAVL TVVLAVKLPK DRRDARLDYA ALMKSLVALV RAQPLIALRS TYGALVFACF SLLWTGLTFL LSQPPYSYSE GQIGLFGVVG AVGALAATSA GRLVDRGHGN AATGLFAAAV LASFALIATG AHSLAALIAG ILLLDVGVQG MHISNQSVIY ALAGNARSRV TTIYLTSYFI GGAFGSFAAS VAYGIDGWRG VCIAGAALSG VLIVLWLASQ RVGVRQVTQ
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