Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A3403 |
Symbol | |
ID | 3748571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 261542 |
End bp | 262747 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637761668 |
Product | HlyD family secretion protein |
Protein accession | YP_367649 |
Protein GI | 78064880 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00376035 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.420161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCGATC ACAATCTGGA CAAACTGAAG ATCGACCGGC GTCCGCTCGC ACCGGCACCC CGCCGGCGCC GGTGGCTCCG CTATGCGGTC GCCGCCGCGG TCGTCATCGG CGCGATCGTC GCCGGCCTCG CGCTCACCGG CCGGCCGGCC GTCGAAACCA CCGCCGTCAC GTCCGCCTAC CCGTACCAGA ACGACACGCA GCTCAATGCG ACCGGCTACG TCGTGCCGCA GCGCAAGGCC GCGGTCGCGT CGAAGGGCCA GGGACGCGTC GAATGGCTCG GCGTGCTCGA AGGCACGCGC GTGAAGAAAG ATGAGATCAT CGCCCGCCTC GAAAGCCGTG ACGTCGAGGC CTCGCTGGCA CAGGCGCTCG CACAGGTGAA GGTCGCCCGC GCCAACCTCG GCGTCGAGCA GGCCGAACTG AAGGACGCCG AGATCGCGTT GCGCCGCACC TCGGTGCTCG CGCCCAAGGG CGCCGTGCCG GCCGCGCAGC TCGACACCGA CACGGCCCGC GTGAACAAGG CGCGCGCGTC GGTCAACAGC GACCAGGCCG CCATCACGTC CGCCGAAGCC AACGCGCAAG CCGCGCAGGT CGCGGTCGAC CAGACGGTGA TCCGCGCCCC GTTCGACGGC ATCGTGCTCG CGAAGCACGC GAACGTCGGC GACAACATCA CGCCGTTCTC GTCCGCATCG GACAGCAAGG GTGCGGTCGT GACGATTGCC GACATGGACA CGCTCGAGGT CGAGGCCGAC GTCGCCGAAT CGAACATCGC GAAGATCCGC GCCGAGCAGC CGTGCGAGAT CCAGCTCGAC GCGCTGCCCG ACACGCGCTT CGCGGGCCGC GTGTCGCGCA TCGTGCCGAC CGTCGACCGC TCGAAGGCCA CCGTGCTCGT GAAAGTACGC TTCGTCGACC GCGACGACCG CGTGCTGCCC GACATGAGCG CGAAGATCGC GTTCCTGTCG AAGCCCGCGT CGGCGCAGGA CCGGCAGCCC GTGACGGCCG TGCAGGCAAG CGCGGTCGTG GAACGCGACG GCCGGCCGGT CGTGTTCGTC GTGAAGGACG ACACCGTGCG CGCCGTGGGC GTGACGCGGG GCGAGCGGAT CGGCGAACTC ATCGCGATCC GCGGCGTGAA GCCCGGCGAC ACGGTCGTGC TCGCGCCGGA CGCGAAGCTG AAGGACGGCG CGAAAGTGAC CGTCGCGAAG AAGTAG
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Protein sequence | MPDHNLDKLK IDRRPLAPAP RRRRWLRYAV AAAVVIGAIV AGLALTGRPA VETTAVTSAY PYQNDTQLNA TGYVVPQRKA AVASKGQGRV EWLGVLEGTR VKKDEIIARL ESRDVEASLA QALAQVKVAR ANLGVEQAEL KDAEIALRRT SVLAPKGAVP AAQLDTDTAR VNKARASVNS DQAAITSAEA NAQAAQVAVD QTVIRAPFDG IVLAKHANVG DNITPFSSAS DSKGAVVTIA DMDTLEVEAD VAESNIAKIR AEQPCEIQLD ALPDTRFAGR VSRIVPTVDR SKATVLVKVR FVDRDDRVLP DMSAKIAFLS KPASAQDRQP VTAVQASAVV ERDGRPVVFV VKDDTVRAVG VTRGERIGEL IAIRGVKPGD TVVLAPDAKL KDGAKVTVAK K
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