| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3248 |
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| Symbol | mnmC |
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| ID | 3748394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | + |
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| Start bp | 80191 |
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| End bp | 82137 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637761511 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_367494 |
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| Protein GI | 78064725 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.826772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC GACTTGTTCC CGCCTCGCTC GCGCTTCGCG ACGACGGCAC GCTCGTCTCG
CCCGAGTTCG GCGACCTCCA TCTCGGCGCA TCAGGTGCGC TTGCGCATCG CGTGTTCGTC
GCCGGCAACG GCCTGCCGAC GCGCTGGCAG GACCGCCGCA CGTTCACGAT CGTGGCGACC
GGATTCGGCG CGGGCGGCAG TTTCCTTGCG GCCTGGGCCG CGTGGCGTGA CGATCCCGCG
CGCTGCGAGC GGTTGCATTT TGTCGCAGTC GAACCGCATC CGTTCTCGCG CGACGACCTG
CGCCGCGCAG CTACTCATAT CGTTGCGGAC ACAACCATAT CGGCGGATGT CGAGGCACTT
GCCGACGCGT GGCCGATGCT TGTACCGGGT CTGCACCGGC TCGAATTCGA CGAAGGGCGC
GTGGTGCTCA CGCTCGCGTT CGGCGAGTCG ATCGACATGC TGGGGAAGAT CGTCGCGCGC
GCCGACGCGT TCTGTCTCGA CGGCCTCGCG TCGTCGAGCG ACGCGGATCT CCAATCGACC
GACGTGGTCC GCGCGCTCTC GAAAATCGCC GGCGAACACG CAACGTTTGC AGTGCATGCG
AGTTCGGACG CGTTGAAACA CGCACTCGGC AAATCGGGTT TCACGTATCG CGAGGTCGAC
GATCTGCTCG TCGGCGAATA TGCGCCGCGC TGGCGCGCGC GCCGGCACGA GCCGCCGCTC
GCACTGCCGG TTGCGACGCG CCGCGCGATC GTGATCGGTG CGGGCCTGGC GGGCTGCGCG
GTCGTCGAGC GGCTGGCCGC GCGCGGCTGG GAAGTCACGC TGATCGAGCG GCACGACCGG
ATCGCGAGCG ACGCATCGGG CAATCCGGCC GGTGTATTCC ATCCGTTGAT GACACGCGAC
GACAACGTCG CGAGCCGGCT CACGCGCGGT GGCTTCCTGC ATGCGATCGC ACGCTGGCGC
GCACTCGAAA ACGCAGGCCA TGCATTCGCG CGCAGTACGA ACGGGATGAT CCATCTCGCC
GAATCGGCCG ACGACTTCGA ACGGATGCGC GATGCATTCG ATGCGTTCGG CCCGCCGTCC
GACTATGTCT CGCTGCTCGA CATCGAGGCC GCGCGCGCGC ATCTGAACCT GTCGGTCGCG
CAGGGCGGCC TGCTGTTTCC GCATGGCGGC GCTGTCTGGC CAGCCGGCCT TTGCGCGGCT
CAATACGCGG CGGCCGGCGA ACGCGTGCGC TTGCTCGCGT CCACCCGCGT TGCAAAACTC
GAACGGCGGG GCGACGCATG GCATGCACTC GACGATGCGG GCGGCACGCT GGCCGAAGCG
CCCGTCGTCG TGCTCGCGAA TGCCGGCGAC GCCGCGCGCC TCGCCGGGCT GCAGCATGTC
GCGCTGCAAC CGGTGCGTGG CCAGCTCACG TTGTTGCCGC CCGGCAGTAC GGCACCGCTG
CCGTGCCCGA CGATCGGCGA CGGCTACGCG GTGCCGCTCG ACGACGGCAC GCTGCTGATC
GGCGCAACGT TCGAACCCGA CGACGTCGAT CCCGCGATGC GCGCGGCCGG CCACCTCGAA
AACCTCGAAC GCGTGCGGCA TCTGCTGCCG GGCCTGATCG GCGACCTGCC GGACCCCGAC
ACACTGCGCG GCCGCGTCGC ATTCCGTTGG GTCGTCGGCG ACCGCCTGCC GCTGCTCGGC
CCGCTCGCGG ATGAAGCCGG CGCCATCGCC AATGCACGCG CGCTGAGCGG TGCGCAGGCG
CGCGACCTGC CGCGCCTGCC CGGGCTCTAC GGCGCATTCG GCTTCGGCTC GCGCGGCCTC
GTATGGGCTG CACTCGGCGC CGAACTGATC GCATCGCAAC TCGAAGGCGA GCCCTGGCCG
CTCGAACGCG AACTCGCCGA TGCCGTCGAC CCCGCACGCT TCCTGATCCG CGCGTTGCGC
GCCCGCCGCG TCGGCCGGGC CGGCTGA
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| Protein sequence | MTDRLVPASL ALRDDGTLVS PEFGDLHLGA SGALAHRVFV AGNGLPTRWQ DRRTFTIVAT
GFGAGGSFLA AWAAWRDDPA RCERLHFVAV EPHPFSRDDL RRAATHIVAD TTISADVEAL
ADAWPMLVPG LHRLEFDEGR VVLTLAFGES IDMLGKIVAR ADAFCLDGLA SSSDADLQST
DVVRALSKIA GEHATFAVHA SSDALKHALG KSGFTYREVD DLLVGEYAPR WRARRHEPPL
ALPVATRRAI VIGAGLAGCA VVERLAARGW EVTLIERHDR IASDASGNPA GVFHPLMTRD
DNVASRLTRG GFLHAIARWR ALENAGHAFA RSTNGMIHLA ESADDFERMR DAFDAFGPPS
DYVSLLDIEA ARAHLNLSVA QGGLLFPHGG AVWPAGLCAA QYAAAGERVR LLASTRVAKL
ERRGDAWHAL DDAGGTLAEA PVVVLANAGD AARLAGLQHV ALQPVRGQLT LLPPGSTAPL
PCPTIGDGYA VPLDDGTLLI GATFEPDDVD PAMRAAGHLE NLERVRHLLP GLIGDLPDPD
TLRGRVAFRW VVGDRLPLLG PLADEAGAIA NARALSGAQA RDLPRLPGLY GAFGFGSRGL
VWAALGAELI ASQLEGEPWP LERELADAVD PARFLIRALR ARRVGRAG
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