Gene Bcep18194_A3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3197 
Symbol 
ID3748378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp29961 
End bp30482 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID637761459 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_367443 
Protein GI78064674 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000871623 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCA CCGCCCTCGA CGACGAAGCA CTGCGCGAAC TCATCCCCAG GCTGAGACGC 
TTCGCGCTCT GGCTCGCGCG CGACGTCCAC GCGGCCGACG ATCTCGTCCA GTCGACACTC
GAGCGCGCGC TGTCGCGCTG GGCGAGCCGC CGCGACGACG CGTCGTTGCG CAGCTGGCTC
TTCACGATCC TTTATAGGCA GTTTCTCGAC GGCAAGCGCA GCGCGAAGCG CTACGCGTGG
CTGCTTGGGC GCATCCGCGA CGACGACGAA GCGCACTGGC CGTCCGCCGA ACGCGAATTC
GCGGCGCGCG CGACGCTCGA AGCATTCGGC CGACTCTCGG ACGAGCAGCG CAGCCTGTTG
CTGCTCGTCG CGGTCGAAGG CTTCACCTAT CAGGAAGTCG CCGATCTGCT CGACATTCCG
ATCGGCACCG TGATGTCGAG GCTCTCCCGC GCGCGCCAGG CGCTGCGCCA GCTCAGCGAC
GGCGAGCTTC CCGCCCCTTC TCTGCGATTG ATGAAGAAAT GA
 
Protein sequence
MPSTALDDEA LRELIPRLRR FALWLARDVH AADDLVQSTL ERALSRWASR RDDASLRSWL 
FTILYRQFLD GKRSAKRYAW LLGRIRDDDE AHWPSAEREF AARATLEAFG RLSDEQRSLL
LLVAVEGFTY QEVADLLDIP IGTVMSRLSR ARQALRQLSD GELPAPSLRL MKK