| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_7082 |
|---|
| Symbol | |
|---|
| ID | 6125990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 1212286 |
|---|
| End bp | 1213449 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641648085 |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | YP_001774677 |
|---|
| Protein GI | 170735563 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0793838 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATT TGTCGAGCCG CACGCTGCTC GAACGGCTGA TCGCCTTCGC GACGGTCAGC
CGCGATTCGA ACCTCGAGAT GATCGGTTTC ATCCGCAACT ACCTCTCCGG TTTCGGTGTG
GAAAGCGAAC TGTTCTACAA CGCGGAACGC ACGAAAGCGA GCCTGTACGC GACGATCGGC
CCGCGCGATC GCGGCGGGGT CGCGCTGTCG GGTCATACCG ACGTGGTGCC GGTCGACGGG
CAGGCGTGGA CGGTCGAGCC GTTCCGGCTG ACCGAGCGCG ACGGCCGGCT TTACGGCCGC
GGCACGGCCG ACATGAAGGG CTTCATCGCA TCGGTGCTCG CGGCCGTGCC GGCATTCGTC
GCGCGACCGC TGAGCGTGCC CGTGCATCTC GCGTTCTCCT ATGACGAAGA GGTCGGCTGT
CTCGGCGTGC GCCCGATGCT CGACGCATTG GCGGCGCGCG AGCATCGGCC GCGCCTCTGC
GTGATCGGCG AGCCGACCGA ACTGAAGCCG GTGCTCGGTC ACAAGGGCAA GCTAGCGATG
CGCTGCCACG TGAAGGGCGC CGCCTGTCAC TCGGCTTACG CGCCGTCGGG TGTCAACGCG
ATCGACTACG CGGCGAAGCT GATCGGCCGG CTCGGCGAGA TCGGTGCGGC GCTCGCTCGC
CCCGAGCGGC ACGACAGCCG CTTCGACCCG CCGTTCTCGA CCGTGCAGAC GGGGTTGATC
AAGGGTGGCC GCGCGCTGAA CATCGTGCCG GCCGAATGCG CGTTCGATTT CGAGGTGCGC
GCACTGCCGG ATTTCGATGC GCACGAAGTG CCGAGAAAGC TGCAGGACTA TGCGGAATCC
GAACTGTTGC CGAGGATGCG CGCGGTGCAG ACCGATACCG ACATTCAACT GCAGCCGCTC
GGCGCGTATC CGGGGCTGGC GACCGCGCCT GACAGCGAGG CCGCGCGCCT GCTCGCGCTG
CTGAGCGGGT CCGATGCGTT CGGCACGGTG GCGTTCGGCA CCGAGGGCGG GCTGTTCGGG
CAGGCCGGCA TTCCGACCGT CGTGTGCGGG CCCGGCAGCA TGGACCAAGG GCACAGGCCC
GACGAGTTCG TCACGCTCGA ACAACTGCAT GGATGCGACG CGATGCTGGG CCGCCTGGCC
GCGTATCTCT CTTCCTCTGC CTGA
|
|---|
| Protein sequence | MSDLSSRTLL ERLIAFATVS RDSNLEMIGF IRNYLSGFGV ESELFYNAER TKASLYATIG
PRDRGGVALS GHTDVVPVDG QAWTVEPFRL TERDGRLYGR GTADMKGFIA SVLAAVPAFV
ARPLSVPVHL AFSYDEEVGC LGVRPMLDAL AAREHRPRLC VIGEPTELKP VLGHKGKLAM
RCHVKGAACH SAYAPSGVNA IDYAAKLIGR LGEIGAALAR PERHDSRFDP PFSTVQTGLI
KGGRALNIVP AECAFDFEVR ALPDFDAHEV PRKLQDYAES ELLPRMRAVQ TDTDIQLQPL
GAYPGLATAP DSEAARLLAL LSGSDAFGTV AFGTEGGLFG QAGIPTVVCG PGSMDQGHRP
DEFVTLEQLH GCDAMLGRLA AYLSSSA
|
|---|
| |