| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6991 |
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| Symbol | |
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| ID | 6125900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 1105520 |
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| End bp | 1106938 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641647995 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001774587 |
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| Protein GI | 170735473 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.231557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACT CGATCGAACC CGTCGCCCCG CCGCCCGCCG CCGAAGCGGC CACCGTCGCC
GCAGCCGTGC CGCCCGCCGC GCGCGGCGCC GCCTCCGATA CGCCGCCACC CCGCCGCGGC
CGCAAGCTGG CCGTGCCGCT CGCGGCCGTC GCGCTCGCCG CCGCGCTGCT CGCGCTCGGC
ATCGTGCCGC GGATCGATGC ACGCGCCGCG CAGCGTGCGC AGGTCGCCGC GCAGCAGGCG
CTGCCGGTGT CGGTCATCGT GCCCGGCGCG GCGCCGGCCG ACCAGACGCT GACGTTGCCC
GGCTCGGTGG CGCCGTATGC GGACGCGTCG ATCTATGCGC GCACGAGCGG TTATATCGCG
CACTGGAGCG TCGATCTCGG CACGCACGTG AAGGCCGGGC AGACGCTCGC GCAGATTTCG
GCGCCCGATC TCGATGCGCA GTTGCGCCAG GCGCGCGCCG ACGAAGCAAG CGCGCAGGCG
AATTACGACT ATGCGAAATC CACCGCGCAG CGCTGGCAGG ACATGCTGAA AACGCAGTCG
GTGTCGCAGC AGGACACCGA CACGAAGGTT GCGGACATGA ACGCGAAGCG CGCGATGCTC
GCTTCGGCTC AGGCGAACGT CGCACATCTC GCCGAACTCG TGTCGTACGA GTCCGTCACC
GCGCCGTTCG ACGGCGTGAT CACCGCGCGC AACGTCGACG TCGGCACGCT GGTCACCGCG
GGCGGCACGC CGGGCAGCCC GGGCCTGTCC GGGGAACTGT TCCATCTCGA ACAGACGGAC
ACGCTGCGCG TGTTCGTCGA CGTGCCGCAG GACAGCGCGA CCGGCGTATC GACCGGCACC
TCTGTCTACC TGACGACGCC GCAGTATCCG GGGCGGCGGT TTGCCGCGCA TGTCGCGCGC
AGCGCGGGCG CGATCGATCC CGTCACGCGC ACGCTGCGTG TCGAGATCGA CGTCGACAAC
CGCGACGGCG CGCTGATGCC CGGCGCGTAT GCGCAGGCGC ATCTCGTATT GCCGAGCGCG
GCGCCGGCGC TCGACCTGCC GGTCAGCGCG CTGCTGTTCC GCCCGAACGG CGTGACGGTC
GCCACCGTCG GCGCGAACGG GCAAACCGCG CTGAAGACCG TGCAGATCGG ACGGGATTTC
GGCACGCGCG TGGAGATCGT TGCGGGGCTC GCCGCGACCG ATCGCGTGAT CGACAACCCG
GGCGATGCGA TCACGGCCGG GGAAGCCGTG AAGATCGTGT CGACCTCGCA CGATGCGGCG
CCGGTTGCGG CTTCGTCTGT TTCGTCTGTT TCTTCTGTTT CGTCCGCGCA GGCCGCGCAA
CCAGCGTCCG CGACCGGTAT GCGCAACGTG CCGCCGCTGC GCGCGGCCGG CGTCGCACCT
GCCGCGTCAA CACCCGCTCC GGCGCCCGCC CGCGGCTGA
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| Protein sequence | MNDSIEPVAP PPAAEAATVA AAVPPAARGA ASDTPPPRRG RKLAVPLAAV ALAAALLALG
IVPRIDARAA QRAQVAAQQA LPVSVIVPGA APADQTLTLP GSVAPYADAS IYARTSGYIA
HWSVDLGTHV KAGQTLAQIS APDLDAQLRQ ARADEASAQA NYDYAKSTAQ RWQDMLKTQS
VSQQDTDTKV ADMNAKRAML ASAQANVAHL AELVSYESVT APFDGVITAR NVDVGTLVTA
GGTPGSPGLS GELFHLEQTD TLRVFVDVPQ DSATGVSTGT SVYLTTPQYP GRRFAAHVAR
SAGAIDPVTR TLRVEIDVDN RDGALMPGAY AQAHLVLPSA APALDLPVSA LLFRPNGVTV
ATVGANGQTA LKTVQIGRDF GTRVEIVAGL AATDRVIDNP GDAITAGEAV KIVSTSHDAA
PVAASSVSSV SSVSSAQAAQ PASATGMRNV PPLRAAGVAP AASTPAPAPA RG
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